Gene Sfum_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3815 
Symbol 
ID4457845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4661805 
End bp4663334 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content62% 
IMG OID639704588 
Productphage tail sheath protein 
Protein accessionYP_847919 
Protein GI116751232 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT ATCTATCGCC CGGGATTTAC ACCCGGGAAA CGGACTTCAG TTTCTATGTG 
AAGCAGATCT CGACCTCGTC GGCCGCCATG GTCGGGGTGG CCGAGAAAGG CCCGATCAAC
AAGCCCGTAC TGGTAACGAG CTGGGAGCAG TTCATCAACC GTTTCGGCTC CTATATCAAC
GAGAGCTATC TGGCCTACGC CGCACGGGCG TTTTTCGACA ACGGCGGATC GGTCCTCTAC
GTCACCCGCA TCGCCCATCT CACCGACCCC ACCGACCGGG ACACACTGAC GGCGCTCAAG
TCATCCGTCG TCCTCCAGAA CCGGGAGGCC ACGCCCGCCG ACACCCTGCG AATAGAAGCA
GTGAACGAAG GCGTCTGGGG CGACCGGCTC TCCATCTCCA TCGAGGACGG CTCTCTCGAT
CCGGCCAACC ATTTCAACCT GGTGGTCCGG CACAAAGGCG ATGTGGTCGA GGTGTTCAAG
GATCTGAGCA TGGACGAGAC GCTGCCCAAC CATGTGGAGC TGGCGATCAA CGACCGCTCG
GATTTCATCC TGGTCCAGGA TCTGGCCGCA GCAACGGGAA CGCCCGGCGA CCGTCCAGCA
TTGGACGTGT TCACGCTCAG CGGCGGCGAC AATGGTCTGA CCGATCTGGC CGATGCGGAC
TTCATCGGCG ATCCCTCGCA GCATACCGGC CTCTATGGCT TTGACGAGAT CGACGCACTG
AACCTGCTGA TGGTCCCCGG CGTCACGACG GTGCCGGTGA TCAACGCCGG AATCGCCTAT
GCCGAGGGGC GCAAGGATCT GCTGTTCATC GCCGACACGC CCATGCACCT GGAGCCGCTC
GAAGCGGTAG ATTTCCGCAA GGGACAAGGG ATGTACAGCC ATGCGGCCTT CAACTCCTCC
TACGCGGCGC TCTACTACCC CTGGCTGGAG ATCAGCGATC CGGTCAACTC GCGCAAGAAG
CTGGTGCCGC CCTGCGGCGC GGTGGCGGGC TGCATCGCCC GCAGCGACCA GAAGACCAAC
GTCTGGAACG CGCCCGCCGG TATCGACCGT GGCCGCATCT TCAACACGCT CTCCCTGGCC
TACAAGACCA GCCGTGGCGA GCGCGATGTG CTCTATCCGG AGGGGATCAA CGTCATCGCC
GTGTTCCCCG ACACCGGCAT CAACATCTGG GGCCAGAAAA CGCTGCAGAG CCAGCCCTCG
GCCGTGGACC GCATCAACGT CCGCCGCCTG ATGATGTACA TGGAGGAAGC TATCTCGGAA
TCCTCCCGCT TCGTGGTGTT CGAACCGAAC CATCCCCAGA CCTGGCGTGC CCTCGGCCGC
CTGATCAATC CCTTCCTTCA GGACATCAAG GACAAGGGTG GCCTCTACGA CTTCGCCTTC
CAGTGCGACG AGGAGACCAA CACCCCGGCG GTCATCGACC GCAACGAAAT GGTGGCCCGC
GTGTTCGTCA AGCCGACCAA GACGGCGGAG TTCATCGAGC TGAACTTCAT CCTGACCAGC
ACCGGCGCGG ACTTCAAAGA AATCATCTAA
 
Protein sequence
MPTYLSPGIY TRETDFSFYV KQISTSSAAM VGVAEKGPIN KPVLVTSWEQ FINRFGSYIN 
ESYLAYAARA FFDNGGSVLY VTRIAHLTDP TDRDTLTALK SSVVLQNREA TPADTLRIEA
VNEGVWGDRL SISIEDGSLD PANHFNLVVR HKGDVVEVFK DLSMDETLPN HVELAINDRS
DFILVQDLAA ATGTPGDRPA LDVFTLSGGD NGLTDLADAD FIGDPSQHTG LYGFDEIDAL
NLLMVPGVTT VPVINAGIAY AEGRKDLLFI ADTPMHLEPL EAVDFRKGQG MYSHAAFNSS
YAALYYPWLE ISDPVNSRKK LVPPCGAVAG CIARSDQKTN VWNAPAGIDR GRIFNTLSLA
YKTSRGERDV LYPEGINVIA VFPDTGINIW GQKTLQSQPS AVDRINVRRL MMYMEEAISE
SSRFVVFEPN HPQTWRALGR LINPFLQDIK DKGGLYDFAF QCDEETNTPA VIDRNEMVAR
VFVKPTKTAE FIELNFILTS TGADFKEII