Gene Sfum_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3806 
Symbol 
ID4457871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4655621 
End bp4658017 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content62% 
IMG OID639704579 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_847910 
Protein GI116751223 
COG category[L] Replication, recombination and repair 
COG ID[COG3392] Adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGT TCGCCACAGA CCTGGAAAGG CTGGCGTTTC TACTGGAGGC CGATGCGGCG 
CTGACTCTCG ATCCCGACAC GCTCGGGTCC GAGGCCGCCG AACAGTCCGC TCCTGAAGAG
CTTCCTCCCG AGAAGCGCCC CAAGTACATC ACCAACTACA TCGGCAGTAA GCAGAAGCTC
GTCGACTGGA TCTGGAAGCA TACCCCGGAG GGCACTGGCA CGGTGCTGGA TGCCTTTTCG
GGGTCTGCGG TCGTGGCCTA CATGTACAAG ACCAAGGGCC TCCAGGTCAT CGCCAACGAC
CGGCTCCGCT ACTGTCACCA TGCCGCCAAG GCGATCATCG AGAACAACTC GGTTCGCCTG
AGCGAGGACG AGATCGAGGC ACTCCTGGCC GACAACGCCA AGGCGGGCAG CTTCGTACAG
GACAACTTCA AGGGCATTTT TTTCGCCAAG GGCGTCCATG CGCTGATCGA CACCATCCGC
GCCAACTGCG ACAAGCTCTC CGGCTTCAAG AAAGACATCG CCCTGTTCGG CCTCGGCAAG
ACCTGCATGA GCGGCAAGGG TGGCTTCGGC CACTTCTCGT CGTCCACCGA TTATGGCCGC
CGCCAAGACA CCCCCGACGA GTTCAAGGAT CGCCTGCGCA AGAACCTGCA GCGTATCAAC
GCCCTGGTTT TCGACAACGA CAAGGAGAAC AAGGCATACC GGCAGGACAT CAACGACCTG
CTGCCGAAAG CCAAGGCGGA TCTGGCCTAC TTCGATCCGC CCTACGCCAC CGAGTTTTCG
ACCACCAACT ACGAGCGAGC CTACCACTTC GTGGAGGGGC TCATGACCTA TTGGGAAGGG
CTCGAAATCA AGGCCGACAC CAAGGTCAAG TATTACGAGA CCGACCACAA GACCGTCACC
AAGGCCAACG CCAACGAGTT CTTCCAGACC TTTCTCGGCA ACGCCAAGCA CATCCCGCAC
TGGCTGATTT CCTACCGCGA TCACGCCTAT CCAAACGAGC AGGAGATGAA GCGGATCATC
GGCTCCTTCG GCAAGCAGAG CCGGATGAAG TCCAAGGATC ACCACTACGC CATCACCTCC
AAGCACGGCG AGGCATCCAA CGCCAAGGAG CGTCTGTTCG TCTGCGCTCC CGGGGCCAAG
GCCAGCGCCG AGCGGGAGGA AAAACCCGTT CCGATGGCCG CCGCCGCGAA CTTCCACACC
AGCATCCCCG TGGATATCCG GCTGGGCGAC AGTGAACGCC TCGCGACCGA GGCCATGGAT
GTCGGCTCGG CGGGCGACCC CCAGTTCAGC TTCGTGCTCT GCCGCACCGG GACCAACAAG
AACGGCGACC ACTTCACCGC CGAGGAGTTG TCCGGTCGGC ACATGACGGC CGTGAACAAG
AAGGTCGATC TGCAGCATTC GCAGGAGTTC AACGACATCG TGGGCGGCAT CGTCGCCGCC
GACTACCTGG AGGACGACAA CGGCGGCCGC GTGGAATGCG TCGGCGAGCT GTACGTCCAC
GACACCCCGG CCGCCCGGCT GGCCTACAAG CTGATGAAGC GCGGGATCAT CTCCCAGGTC
TCCATGGAGT GCGACTACCA GGAGGGCGAA TGCTCGGTCT GCCACAAGCG CTTCCAGAAC
AAGGCCGACT ACTGCACACA CCTGCGCAAA TTCAAGGGCC GTGATTTCAA CGGCCAACCC
GTTTTCGAGA TTCTGCACGG CGTCACTTTC ACCGGACTGG GACTGCTCGA CCGCAAAGGC
GCGGACGAGA ACGCCAGGAT TCTGCAGGTG GCGTCCCTTC AGAGCCAGCC CGACCAATCC
CAACCCGAAG GAGATTCCAC GATGGAAGAC AAAACCAAAC CTACCGATGA CCCGGCCGTC
GAAGCGGCCA AGAAGAAACC GGCCCAGCAG GAAGGCGATC CTGCCCGCGT TTCCGACCTG
GAAAAGGAAA ACCGGCAGCT CAAGGCCCAG GTGGCCGAGC TGCAGAAACG CGTCCAGGAA
CTGGAAGCCG AACAAAAGGC GGCCGCTTGC CGCTCACGCG CCAAGAAACT GCTCACCCGG
CTGGAGAAGC AGGGTCTCTC CTTTGCGTCC GATGAGGACC GGGAAGCCGA GCTGAAACGC
CTGGCCGAAC TGTCCGACGA AGCCTTCGCC GCCACCGAGG CCGCTTACGA GCGCCTGCCC
AAATCGGCCA AGGCGGACAA GGACAAGGAA GAGAAACCCG CTGACAGCGA CCAGGGCGGC
AAGCCCGCCG CCAAGGCATC GACGGAAACC CCGCTGCGCA GCGACGCCGG TGTCAGGCCC
CACGATGTGG ACGACCGCAA GGTGTCGCTC GAGGACCGTC TGCGCGACGG GTTCATGGCC
GCTTACCGCA ACCGTGTCGG CGAGGACTCT CCCGAACACT CGCAAATCAA CGCATAA
 
Protein sequence
MELFATDLER LAFLLEADAA LTLDPDTLGS EAAEQSAPEE LPPEKRPKYI TNYIGSKQKL 
VDWIWKHTPE GTGTVLDAFS GSAVVAYMYK TKGLQVIAND RLRYCHHAAK AIIENNSVRL
SEDEIEALLA DNAKAGSFVQ DNFKGIFFAK GVHALIDTIR ANCDKLSGFK KDIALFGLGK
TCMSGKGGFG HFSSSTDYGR RQDTPDEFKD RLRKNLQRIN ALVFDNDKEN KAYRQDINDL
LPKAKADLAY FDPPYATEFS TTNYERAYHF VEGLMTYWEG LEIKADTKVK YYETDHKTVT
KANANEFFQT FLGNAKHIPH WLISYRDHAY PNEQEMKRII GSFGKQSRMK SKDHHYAITS
KHGEASNAKE RLFVCAPGAK ASAEREEKPV PMAAAANFHT SIPVDIRLGD SERLATEAMD
VGSAGDPQFS FVLCRTGTNK NGDHFTAEEL SGRHMTAVNK KVDLQHSQEF NDIVGGIVAA
DYLEDDNGGR VECVGELYVH DTPAARLAYK LMKRGIISQV SMECDYQEGE CSVCHKRFQN
KADYCTHLRK FKGRDFNGQP VFEILHGVTF TGLGLLDRKG ADENARILQV ASLQSQPDQS
QPEGDSTMED KTKPTDDPAV EAAKKKPAQQ EGDPARVSDL EKENRQLKAQ VAELQKRVQE
LEAEQKAAAC RSRAKKLLTR LEKQGLSFAS DEDREAELKR LAELSDEAFA ATEAAYERLP
KSAKADKDKE EKPADSDQGG KPAAKASTET PLRSDAGVRP HDVDDRKVSL EDRLRDGFMA
AYRNRVGEDS PEHSQINA