Gene Sfum_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3793 
Symbol 
ID4457858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4642428 
End bp4643198 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content61% 
IMG OID639704566 
Producthypothetical protein 
Protein accessionYP_847897 
Protein GI116751210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC TGAAAACCAT GATCAAGCAC ACCGCTGGAG GACAGGACGC CTCGGCCGGA 
TGTGAAGTCC CATTATTACC ACCGCAACCA CCGCAGCCCG CCATCTATGT CTCCACCGGG
CTCGACGTCC ACGAGATCGA GGACGCCAGT GACTGGCCTG AAGACAGGGA GGTCAACGGA
ACGCTGTGTC GCCGTCTGTC GCCTGAATAC TTTGCTTGGC TACGTTCCCG CATGGTCACC
GCCCAAGCCG CGCACAAGGC CGGAAAGCTC CCCGAGGATG CCTGGAACAC GCTGCGGCAG
AGGTTCAACG CCCTGCAGGA GCTGGCCATC CGGGAGTTCG GCAAGGAAAG CCTTCAAGAG
GTCCTGCAGT CCTTTTCTCC AAAGAACTAT CAACCACCCG CGCTTCGTCC CGAGCCCCAG
GAGAAACCCG TCGAAGTTCC CAGAAAGGAC TGGATTTATC CCGGGAACCA AGCTTGGAAA
TGTAAGCAGC CGGTGACTTC CCAGGCTGTC GCCAAGGTCG ACGCCATCCG TGAGGAGGCC
ATGGCCAAGG GCTGGTCCGA GGCACGCCTC TATCGGAACC AGGGCCGCTT CCGGTTTCCC
TGCGGCGAGG ACTACGGCCT GGTCTGCTTC GTCGATGGCG ATCAGGAGAT TGGCGAGGTC
ACCGAGCGTT CTATCGAAAT TATCCACGGG CCGAAGTCCG GGCGTCCTAG CACGCTGCGG
TTCTACAACC CGGACGTGCC GCAGCCGTGG ATGAAGAAAG TGGAGGATTG A
 
Protein sequence
MSLLKTMIKH TAGGQDASAG CEVPLLPPQP PQPAIYVSTG LDVHEIEDAS DWPEDREVNG 
TLCRRLSPEY FAWLRSRMVT AQAAHKAGKL PEDAWNTLRQ RFNALQELAI REFGKESLQE
VLQSFSPKNY QPPALRPEPQ EKPVEVPRKD WIYPGNQAWK CKQPVTSQAV AKVDAIREEA
MAKGWSEARL YRNQGRFRFP CGEDYGLVCF VDGDQEIGEV TERSIEIIHG PKSGRPSTLR
FYNPDVPQPW MKKVED