| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3789 |
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| Symbol | |
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| ID | 4457889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4634496 |
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| End bp | 4636592 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704562 |
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| Product | hypothetical protein |
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| Protein accession | YP_847893 |
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| Protein GI | 116751206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0516841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.691917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCGCCC GGGAAAATCA GCCTGTGGTC CTGCTCGGGT CGTGGGCCAC CCATCCCAAA
TACGGCCGTC AGTTCAAGGT CGACGGGATG GAGCACGACC TCGAACTCGA TCCGGAGGGG
CTGATCCACT ATCTGGCCAA CCATCCGGAG ATCAAGGGCA TTGGTCCGGG CAAGGCCAGA
TTGATCGTCG AGAGTTTCGG CGACGCCTTT GAAGAAACCC TTCTGAACGA CCCCGAGCGC
ATCGCGCTCA AAGCTCGGCT GCCCTTGGAT GCTGCCCGGC GGCTGCGTGA CGAATGGTTG
AAGAACCGCA GCGTCAACGC CGTCATGGCC TGGTTGTCGG CATTCGGCCT GACCCATCAT
CAGGTCACCA CTCTGGTCGA AAGACTCGGC GGCAACTGCC TCGATATCCT GAAGGAAGAC
CCGTACATCC TCATTCGGGA GATCCGGGGA TTCGGCTTCA AGAAGGTCGA CAAGATTGCC
CGCAAGCTGG GCACCCCCAA GGACCATACC CCTCGTATCC GGGCCGGGTT GAATTTCTGC
GTCCGAGAAG CCCTGGACAA TGGCCACTGC TGGATCGAAT ACGAGGATCT GGTGGACCAG
GCCAATCTGC TGCTGGTCAT GGATGCCCTG GACAGCCGGG TCCGTATCGA AAGCGCCCTC
GACGCGCTCA TCGAAGAACA GGCGCTTGCC TGCGATTCCC ACGGCGAACG TTTCGTGGTC
GCTCTGCCGG AGATCGTCCG CATGGAGCAG GAGCTGGCCT CGTTGTTCGG ACAGGCCGAA
ACACCCAACC CGCATTTCCA GTCCGTCAAG AAACTCGATG CCCTGATTCG GCGCTGCGCA
TCAACGCTGA ACGAGAAGCA GCTCGAAGCG GTGCGCTCGG CCCTCCAGCA CAGCATCAGC
CTGATCTCGG GTGGAGCCGG TTCGGGCAAG AGTTACACCA TTTCGGTCAT CAACACCATC
TGCGAGGAGA GCGATCTGGA GGTCGTGCTC GCCGCGCCGA CCGGCAAGGC GGCCAAGCGC
CTGGAGGAAG TCAGCGGTCG CAGCGGCACC ACCATCCACC GTCTGCTCGG CTATGACGGC
AAGGGTTTCT CGCGCAGCAT GGAGAACCCC ATCGATGCCG ATGTCCTGGT GGTCGACGAG
TTTTCGATGG TCGATGTGCC GTTGGCCTGG CACCTGTTCG AGGCGGTCGA TCTGTCGCGG
ACCACGGTGC TGCTGGTCGG GGACCACAAC CAGCTTCCGC CGGTGGGACC AGGGAACATC
CTGCGCGATC TGATCCAGAC ACGCGCCATC CCCACGGTCA TCCTCGACAA GGTCGTGCGT
CAGGCTGGCG TCCTCAAGGA GAACTGCACC GCCGTTCTCA AGGGCGAGGT GCGCAAGACC
AGCGAGGCGT CGGTGGCCGG ATGCCGGGAT TGGTATCTGG TGGATCAGTT CACCGACCCG
ATGGCGGCAC GCTCGTTCCT GCTGGAGTTG TTTCAGGAGC GGCTCGATGC CCTGGGTTTC
GACATCATCA AGGACGTGCA GGTGCTGACG CCGACCCACA AGGGGCCACT CGGCACCAAG
GAATTGAATG AGGAACTGCA GCGGCTCATC CAGCGCAAGC TCTGGAACAC CGAGGTGCCG
CCGGTCGCCT TGGGCCGCCG CGCCCCGTTT CTCAAGCACG ACAAGGTCAT CCAGACCCGG
AACAATTACG ACCTGAACGT GATGAACGGT GCCATCGGCT ATGTGGTCGA TGTTCTCGCG
AACGGCACTC TGGTCATCGA CTTCGACGGC ATGCCGGTGG AACTGGAGAA AGGGTCGCCC
GACCTGCAGG ATCTACAGCT CGCCTATGCG CTCACCATCC ACAAAACTCA GGGTTCCGAG
TTCCCCTGCG CTGTGGTGGT GGTTCACAAG GCGCATTCCT TCATGCACCA CCGCAATCTG
CTCTACACCG GGGTGACCCG CGCCCGGCGC ACCGCCATTG TTCTGGGTGA TCACTGGGGC
ATCCAGAACT GCGCCAAGCG ATGCCAGGTG GATGACCGCC GGACCTTTCT GCCCCTGTTT
CTGGACGCCG CCCAGCACGA GGAAGCCGAT TTCGCCCGTA TCGCGGAGGC CGAATGA
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| Protein sequence | MFARENQPVV LLGSWATHPK YGRQFKVDGM EHDLELDPEG LIHYLANHPE IKGIGPGKAR
LIVESFGDAF EETLLNDPER IALKARLPLD AARRLRDEWL KNRSVNAVMA WLSAFGLTHH
QVTTLVERLG GNCLDILKED PYILIREIRG FGFKKVDKIA RKLGTPKDHT PRIRAGLNFC
VREALDNGHC WIEYEDLVDQ ANLLLVMDAL DSRVRIESAL DALIEEQALA CDSHGERFVV
ALPEIVRMEQ ELASLFGQAE TPNPHFQSVK KLDALIRRCA STLNEKQLEA VRSALQHSIS
LISGGAGSGK SYTISVINTI CEESDLEVVL AAPTGKAAKR LEEVSGRSGT TIHRLLGYDG
KGFSRSMENP IDADVLVVDE FSMVDVPLAW HLFEAVDLSR TTVLLVGDHN QLPPVGPGNI
LRDLIQTRAI PTVILDKVVR QAGVLKENCT AVLKGEVRKT SEASVAGCRD WYLVDQFTDP
MAARSFLLEL FQERLDALGF DIIKDVQVLT PTHKGPLGTK ELNEELQRLI QRKLWNTEVP
PVALGRRAPF LKHDKVIQTR NNYDLNVMNG AIGYVVDVLA NGTLVIDFDG MPVELEKGSP
DLQDLQLAYA LTIHKTQGSE FPCAVVVVHK AHSFMHHRNL LYTGVTRARR TAIVLGDHWG
IQNCAKRCQV DDRRTFLPLF LDAAQHEEAD FARIAEAE
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