| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3776 |
|---|
| Symbol | |
|---|
| ID | 4457876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4624186 |
|---|
| End bp | 4625772 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639704549 |
|---|
| Product | recombinase |
|---|
| Protein accession | YP_847880 |
|---|
| Protein GI | 116751193 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.902088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATA ACAGCAATGT CGCGCCGGGA AAGAAAAAGA CCCTGCGCTG TGCCATCTAC
ACCCGCAAGA GCCACGAGGA AGGGCTCGAA CAGGAATTCA ACTCGTTGGA TGCGCAACGG
GAATCGGCGG AACACTATAT CGAAGCCCAG AGAATGCGTG GCTGGACGGC TCTGCCGGAT
CGCTACGACG ATGGTGGTTT CTCGGGTGGG AACATGGAGC GCCCGGGGCT GCGCCGACTG
CTGGCGGACA TCGACGCCGG GAAGATTGAT GTGATCGTGG TCTACAAGGT CGACCGACTG
TCCCGCTCGC TGCTGGACTT CATGAAGATG ATCGACCTCT TCAACGAAAA GGGCGTCAGC
TTCGTTTCGG TCACCCAGCA CTTCAGCACC ACCGACCCCA CCGGCCGAAT GTTTCTCGGC
ATCCTGATCA CCTTCGCCCA GTACGAGCGG GAGGTCATTG CCGAACGCAT CCGGGACAAG
GTGGCGGCAG CCAAGCGCCG GGGGAAATAC TGCGGCGGCG TACCCATCCT CGGATACGAC
GTCGACAGGG ACAACAAGAA GCTGCTGGTC AACCCAGATG AAGCCAGGAC GGTGCAGTAC
ATCTTCCGCC GGTTCATCCA GATCGGCTCG GCCAAGAAGC TGGGCCAGGA ATTGAACGAA
CAGGGATACC GCACCAAGGC CTGGACCACC AAGAAAGGAA AGGTGCGCGA TGGCTCCGAA
TGGAACACCG CCCACATCTA CCGGCTGCTC AACAACCGAA TCTATATCGG CGAGATCGCC
CACAAGGATC GCAGTTACCC CGGCGAGCAC GAAGGGATCA TCGACCGGGC GACCTGGGAC
AAGGTGCAAG CCATCCTGGA GGACAACAAA CCGGTCAAGG TATCCATGGC CAGAACCAAA
ATGGTCGCCC CGCTGAAAGG CGTCATCCGC TGCGGCCACT GCGGATGCGC GATGGGACCG
ACCTACGCCC GCAAGAACGG CCGCCACTAC ACCTATTACA TCTGCCAGAA GGACAGCAAG
CGGACCGTGA GCCGATGCCC GCTCAAGCGG ATTCCCGCCG GGGACATCGA GCAGGCGGTA
ATCGAGCAGT TGAGCGCCGT GTTCCGCACA CCGACGCTGG TGGCCAAGAC CTACTTCGCA
GCCCGGGACA TCGAGCAGGC GGAGCGAGAG CGGCTGTTCA AACAGAACGC CCAGCTCGAG
ATTGAGCTGT CGCAGGCGCG AGAGCAGGCA CTTGAACTGA TGAAGCCCGG CAACGATCAG
CCGGGCAAGG CCGAGATGCT GACGACCGTC AACCGCCAGG CGGTCGAGCT CTCAAAACAA
CTGACCCATG TGAGCGAGCG ATGCAGAGCC TACCAGGGGA ACAGCATCAC GGAACAGGAT
GTGTCGGAGG CCTTCCAGAA TGTGGAGGGG TTCTGGGAAG ACCTTTTCCC GGTGGAGCGG
AATCGCCTCA TCCGCCTCCT GGTGGACAAG GTGGAGATCC GCGAGACCGG AATCGACATG
GAGCTGCGCA CCAACGGGCT GACAACGCTA ATCGCCGAGC TGGCCGGTCT GGCATGCGAA
GTCACGGAAC GGAGGACAAG CCGATGA
|
|---|
| Protein sequence | MLDNSNVAPG KKKTLRCAIY TRKSHEEGLE QEFNSLDAQR ESAEHYIEAQ RMRGWTALPD
RYDDGGFSGG NMERPGLRRL LADIDAGKID VIVVYKVDRL SRSLLDFMKM IDLFNEKGVS
FVSVTQHFST TDPTGRMFLG ILITFAQYER EVIAERIRDK VAAAKRRGKY CGGVPILGYD
VDRDNKKLLV NPDEARTVQY IFRRFIQIGS AKKLGQELNE QGYRTKAWTT KKGKVRDGSE
WNTAHIYRLL NNRIYIGEIA HKDRSYPGEH EGIIDRATWD KVQAILEDNK PVKVSMARTK
MVAPLKGVIR CGHCGCAMGP TYARKNGRHY TYYICQKDSK RTVSRCPLKR IPAGDIEQAV
IEQLSAVFRT PTLVAKTYFA ARDIEQAERE RLFKQNAQLE IELSQAREQA LELMKPGNDQ
PGKAEMLTTV NRQAVELSKQ LTHVSERCRA YQGNSITEQD VSEAFQNVEG FWEDLFPVER
NRLIRLLVDK VEIRETGIDM ELRTNGLTTL IAELAGLACE VTERRTSR
|
|---|
| |