Gene Sfum_3768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3768 
Symbol 
ID4457901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4610324 
End bp4610857 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID639704541 
ProductDtxR family iron dependent repressor 
Protein accessionYP_847872 
Protein GI116751185 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000422778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCAG ACGATGAATT CCATGATGAT CTGTCCGCCA GCCTGGAGGA TTACCTGGAA 
GTCATTTTCC ACCTGGAACA ATCCAACCGG GTTGCGAGGG CGAAAGACAT CGCCGACCAG
ATGAGCGTTC AGCGCGCTTC GGTGACGGGG GCGCTCAAGG CTTTGGCCGC CCGGGGGCTC
ATCAACTACA GTCCTTACAG CTACATCACC CTGACCACCG CCGGGCGCGA CATCGCCCGC
GACGTCATCC ATCGCCACGA CACGCTGAAG GAGTTTTTCG TCACCGCGCT CCAGCTCAGC
GCCGAGGAGG CCGAAGCCAA TGCCTGCCGC ATCGAACATG CCATTGCGCC CCTGGCCGTG
GAGCGCCTGG TTCGGTTCCT CGAATTCATC AACGCCTGCC CGCGCACGGG CAAGGACTGG
TTCGACGCGT TCGCAAGGTA CTGCACTCGC GGAGCCCGGA CTTCGAACTG CGAGCAGTGC
CTGAAGGACT GCTTCGAACG CAACAGCGCA CCCGACGGGA AGGACGACGA CTAG
 
Protein sequence
MLPDDEFHDD LSASLEDYLE VIFHLEQSNR VARAKDIADQ MSVQRASVTG ALKALAARGL 
INYSPYSYIT LTTAGRDIAR DVIHRHDTLK EFFVTALQLS AEEAEANACR IEHAIAPLAV
ERLVRFLEFI NACPRTGKDW FDAFARYCTR GARTSNCEQC LKDCFERNSA PDGKDDD