Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3759 |
Symbol | |
ID | 4457892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4594069 |
End bp | 4595745 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639704532 |
Product | hypothetical protein |
Protein accession | YP_847863 |
Protein GI | 116751176 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.424796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCGTG GAAAACAACA AGTTCTATTT AATTACCTGC CCAACCGTAC TTTCGATTTC GAGCGTGTCG CGGCCATTGC TCGGGTTGTT GAAATTCGTG GTGATCCGCG AACTGATCTA AATGCGTCTG TCATCCTCCG CAGGATTGCA GAAGAAGCTA GTGCTTGGCA AGAGGACTTT AGGCCCGTGC TTCGTGATGA TGTGTTTAGG CAGGCGGATC GTTTTGTTCT CCTCGATCCC CGGAGCATTC AATCAGAGCT ATTCCCAAAA GTTTTTTGGT GCCAAGATCG CCGATGTGGC CGGATTTTCG ATTTCAGCAA TAGAGATTCC TTGCCTCAGC AATGTCCATC ATGCCGCCAA GGACGATTGG TGCAACTGCG TTTTGTGAAA ATTCACCGCT GTGGTGCTTT ACAACCACTG CTTCCACCAC AATGCCGGCA GTGCCGCACT GCGAACCATA TGGCTTTAGA TACGCGTGGT AGCGAGCGTA TATCTAACTT TCGGTGGGTC TGTCGCCGCT GCAATTCGGC ACAGACTCCA TATGGTGGGT ACTGCGCCGA ATGCCAGTGG CCGGACCAAA ATCTCCGTGG CATGGACATC GAAGTACATC GAGCGGGGCG CACATTTTAT GCTCATACAA CCGTCCTGCT CAATATTCCC CATCGAAGGT TTGATTCGTT TTTTGCCTTA CCTGAATGGC AAGCTATAGC TTCGGCGAAG TTACTGGAAA TGGAAGAAGT TGCCGGTCAT AATTTGACAG AGTATGGAAC GAGGGCCCAA GCTTCGCAAG GCACTCAAAG TGCGGGCCTT TCAGGAGCTG ACTTAGATGA ACTCATGCGT CGGCAGGCCA GCGGCGAACT CACACCTGAG CAATTTGTTC ATGAGATGCA GAGCCTCCGC GAGGTGCGGC AACAAGAACA ACAAGCAAGT TCGCCAAGCG GTATTGTTCG AAGTCTTTGT GAGCGTACCG GTGTACCTTG GTCAATCTGG AATCGAGCCG GTCAGGAAAT GCTGGAAGCG ATTATGCCGA TGGAAACTGG CCGACCAACG GAACTCGACA TGCAGAATCC GACTGAACCG AGCACTATTG CACGGCAGAT GGGATTTTCC AGGCTGGCTT TGGTATCTGA TTATCCTATA ATTACTGCCA CCTATGGATT CAGTCGTGCT GAATATTCGC CAAATCAGTG CCGCTTGAAT CCCTTTCCAG CTCACAAGGA TCATGGCGGC AAATCCCCTA TCTTTGTTGA CCAAGTGCAG GCCGACGCTC TACTGCTCAG CTTGAGCCCC GAGCGCGTTA TTATCTGGCT CGAAATGAAC GGATATCACC CAGTCATTCC TCCTGGAACC GATCAACACC TTGCCCGAAA GGCATATTTT GTTCAGCTTC TCAGTGAGGC ACCTGTCCGC GAGACGTTGC GTGCTGATCG CCCAGAAGCC AGAATGGTTT TTGGCTTATT GCACACGCTA AGTCATCTGT CAGTCCGCCA AGCGGCTCTC CTCAGCGGCT TGGATCGCAC CAGTCTATCT GAATACGTGC TGCCTCGTGC ACTTACGTTT GCTCTCTATT GTAATCACCG TTTTGGCGCA ACAATCGGTG CACTGACCGC GTTATTCGAA CAATCGCTGA CAGAGTGGCT TCATGCGGTG CGGGAAACTA GCCCGGAAAA TTCATAA
|
Protein sequence | MTRGKQQVLF NYLPNRTFDF ERVAAIARVV EIRGDPRTDL NASVILRRIA EEASAWQEDF RPVLRDDVFR QADRFVLLDP RSIQSELFPK VFWCQDRRCG RIFDFSNRDS LPQQCPSCRQ GRLVQLRFVK IHRCGALQPL LPPQCRQCRT ANHMALDTRG SERISNFRWV CRRCNSAQTP YGGYCAECQW PDQNLRGMDI EVHRAGRTFY AHTTVLLNIP HRRFDSFFAL PEWQAIASAK LLEMEEVAGH NLTEYGTRAQ ASQGTQSAGL SGADLDELMR RQASGELTPE QFVHEMQSLR EVRQQEQQAS SPSGIVRSLC ERTGVPWSIW NRAGQEMLEA IMPMETGRPT ELDMQNPTEP STIARQMGFS RLALVSDYPI ITATYGFSRA EYSPNQCRLN PFPAHKDHGG KSPIFVDQVQ ADALLLSLSP ERVIIWLEMN GYHPVIPPGT DQHLARKAYF VQLLSEAPVR ETLRADRPEA RMVFGLLHTL SHLSVRQAAL LSGLDRTSLS EYVLPRALTF ALYCNHRFGA TIGALTALFE QSLTEWLHAV RETSPENS
|
| |