| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3752 |
|---|
| Symbol | |
|---|
| ID | 4457919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4585039 |
|---|
| End bp | 4586403 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639704526 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
|---|
| Protein accession | YP_847857 |
|---|
| Protein GI | 116751170 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG CCGCGGTTGC AGCGCCCCTT GCCGGGATGT TCTACAACGC ACCGTTGACC
CTCTCCTGGC CTTTGTTACT CCTTTACTAC CTGGTGCGTT CGAAGACGGA CGGAAAATAC
CGGTCCAACC TGAGGGAGCG GATGGGCGTG AGCCTGCCGC CGCGGTCTTC GCGCACGTCG
CGCCGCATAT GGATCCACGC ACTCTCTGTG GGGGAAACCG TGTCGGTGAC GCCCCTGGTG
AAGGAATTGA AAATCCGGTG CCCGGAGCTC GAGGTGGTGG TGTCGAGCGC CACCGAATCG
GGACGCAGGA TTGCCGAAGA CCAACTGGCA CCCTTTGCCG CCCTTTTTTT TACCCTGCCT
CACGACTTCC CATGGGCGAT GAAGAAAGTG GTCGAACGGA TTCGACCCGA TCTTTTCGTG
CTCGTGGAAA CGGACATTTG GCCCAACCTG CTGGCCTCCC TGAGGCGGAG TCGCATCCCC
GCCCTGCTTC TCAACGGGAG GATTTCGCCC GGATCGTTTC GGAAGCTTGT CCCCTGGAAG
GCGTGGATCG GGGGTCTCTA CCGAGCCTTC GATCTCATTT TCGCCCAGTC CGCTGAGGAC
CGGGAGCGGT ACCTGGCGAT GGGGGCCTTG CCGGAAAAGG TGGTCGCGGC GGGGAATCTG
AAATTCGATG CTTCGGGTTC CCTCCCGACG GCGGAGGAAT CGGCCGCCCT GCGCGAAAGC
GCGGGCATTG ATCCCGGCCG GTCGGTCTGG ATTGCAGGAA GTACCCACGA AGGAGAAGAG
GACCTCCTGC TCCGGGTCCA TCGCTCCCTC CTGCTCGAAC ACCCCCGTCT TTTGCTGATC
CTCGCCCCGC GTCAGCCGAC GCGAAGGTCC GAAGTGCTCG CCCTTTGCGA AAGCCACGAT
TTGAGCGCGG TTGCGCGGTC GAGCGGCCGG ACCGCTCACG ACGGGTCCGT CTATCTCCTG
GATACCATGG GAGAATTGAG CCGATTCTAC GCGCTCGCCG ATGTCGCCTA TATCGGCGGC
AGCATGGTCC CGTTCGGCGG GCACAATCCC CTGGAGGCGA TCCGGCATGG GAAGCCCGCC
CTGTGGGGAC CTCATCTGTT CAATTTCAGA GAGATCGAAA AAGACCTGCT TGAAGCCGGA
TGTGCCTGTT GCGTGCCCCA TGCCGCCCAA CTCGAAAACA CAATGCGAAG CTGCCTCGCC
GATTCCGCGA AAAGGGAGCG CATGCGGACG GCCGCAATCG AGTTCATGGC GTCACACCCC
GGTCCCGGCC CGAAACTGGC CCGGTTGATT CTGGAAAGGA TGACCCGGTG CGGTCGACCT
TCGGGAAGGG GCGGGGTGCC CGAGCCCCGG AACACCGGGG AATGA
|
|---|
| Protein sequence | MKPAAVAAPL AGMFYNAPLT LSWPLLLLYY LVRSKTDGKY RSNLRERMGV SLPPRSSRTS
RRIWIHALSV GETVSVTPLV KELKIRCPEL EVVVSSATES GRRIAEDQLA PFAALFFTLP
HDFPWAMKKV VERIRPDLFV LVETDIWPNL LASLRRSRIP ALLLNGRISP GSFRKLVPWK
AWIGGLYRAF DLIFAQSAED RERYLAMGAL PEKVVAAGNL KFDASGSLPT AEESAALRES
AGIDPGRSVW IAGSTHEGEE DLLLRVHRSL LLEHPRLLLI LAPRQPTRRS EVLALCESHD
LSAVARSSGR TAHDGSVYLL DTMGELSRFY ALADVAYIGG SMVPFGGHNP LEAIRHGKPA
LWGPHLFNFR EIEKDLLEAG CACCVPHAAQ LENTMRSCLA DSAKRERMRT AAIEFMASHP
GPGPKLARLI LERMTRCGRP SGRGGVPEPR NTGE
|
|---|
| |