Gene Sfum_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3748 
Symbol 
ID4457915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4580699 
End bp4581142 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID639704522 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_847853 
Protein GI116751166 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG CAAAAATCAT GGGATACTTG CCGCATCGCT ATCCGTTCCT CCTGGTGGAC 
CGGATTCTCG AGCTGACCTC GGAAGAGATC GTGGGGCTCA AGAACGTGAC GATCAACGAA
CCCTTCTTCC AAGGGCACTT CCCTGGGGAA CCGATCATGC CCGGAGTGCT GATCATCGAA
GCGCTCGCGC AAACCGGGGG GGTCCTCGCG TTCACGCTCG TCTCCGATTT CCGCGGCAAG
CCCATCTACT TCATGGGGAT GGACAAGGTT CGCTTCCGCA AGCCGGTTCG GCCTGGAGAC
CAGTTGATTT TGAAGCTGAA AATCTTGAAG CGCAGGGGAC CGACGTTCAA GATGAGCGCG
GAAGCTTTCG TGGAGGAGCA ACTGGTGGCC GAAGCCGAAC TGCTGGCGAC CATCGGCGCC
GCGAAATCCG AACGGGAAGC CTAG
 
Protein sequence
MDIAKIMGYL PHRYPFLLVD RILELTSEEI VGLKNVTINE PFFQGHFPGE PIMPGVLIIE 
ALAQTGGVLA FTLVSDFRGK PIYFMGMDKV RFRKPVRPGD QLILKLKILK RRGPTFKMSA
EAFVEEQLVA EAELLATIGA AKSEREA