Gene Sfum_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3747 
Symbol 
ID4457914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4579627 
End bp4580694 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID639704521 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_847852 
Protein GI116751165 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.393087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCT GTTTCCAGGG TGATTCCAGG AAGTCCTACT CGCTTTCGGA GCTTGCGGAG 
ATTCTGGGAG CCGCCGTCCG AGGCGATCCC GCCATTCGAA TCCGTGGAGT CAATTCTCTG
GAAGATGCGC TTCCGGACGA GTTGAGCTTC ATCACGGATG TCCGCTACAA GCCGTTGCTT
TCGAAATGCA GGGCGGCGGC CATCATTGTG TCTCCCGCCC TGGCGGAGCT GGAGTTCCCT
CTGCTCGTCG CCGAACGCCC GTATGTGGTC TTCGCCAGGG CTGCGCAGCT GTTCGCCGAG
CCTCCCTTTC TCGCTCCGGG GGTCCATCCC GGCGCGTACA TCGGGCCCAA TGTGCATTTG
GGGGAAGGGG TATCGGTCGG TCCGCAGGCG CACATCGGGG AGGACTGCGT CGTTGGGCCG
GGAACGCGCA TCTACGGTTC GGCCTACTTG GGTCCCGGCG TAAGGGTGGG TGAGAACTGC
ATGCTTTATC CCGGAGCCGT GATCCTGGAC CGATGCCTTT TGGGAAATCG CGTGACCGTT
CACAGCGGAA CGGTCGTGGG CAGCGATGGA TTCGGGTATG CCCAGGATGA GAAAGGGCGT
CACGTCAAGA TTCCGCAGAC GGGGATCGTG CAGATTGACG ACGATGTGGA AATCGGAGCG
AACTGCACCG TCGACAGGGC CACTTTCGGC CGGACCTGGG TCCGGAGGGG CGCCAAGATC
GACAACCAGG TCCAGATCGC GCACAACGTC GTGATCGGTG AACACGCGAT CCTTGTGGCC
CAGGTGGGCA TCTCGGGGAG CACCACACTC GGCAGTCACG TCGTTCTCGC CGGCCAGGTC
GGTGTGGCGG GGCACATTGA AATAGGGGAC CGCGCGCGCG TGGGCGCGAA GTCGGGGGTG
CATCATTCCG TCGGGGCCGG CGAGGACATC CTGGGAATAC CCGGTGTACC GGCCAGGGAA
TGGAAAAGAA CCTACGCCAA TATCCAGCGT CTCGCGCGGT TTCGGGAGGA ATTGCGGCTG
CTGGTCGAGA AAGTGCAACG GATCGAAAAA GCACTCGACG GGGAATGA
 
Protein sequence
MESCFQGDSR KSYSLSELAE ILGAAVRGDP AIRIRGVNSL EDALPDELSF ITDVRYKPLL 
SKCRAAAIIV SPALAELEFP LLVAERPYVV FARAAQLFAE PPFLAPGVHP GAYIGPNVHL
GEGVSVGPQA HIGEDCVVGP GTRIYGSAYL GPGVRVGENC MLYPGAVILD RCLLGNRVTV
HSGTVVGSDG FGYAQDEKGR HVKIPQTGIV QIDDDVEIGA NCTVDRATFG RTWVRRGAKI
DNQVQIAHNV VIGEHAILVA QVGISGSTTL GSHVVLAGQV GVAGHIEIGD RARVGAKSGV
HHSVGAGEDI LGIPGVPARE WKRTYANIQR LARFREELRL LVEKVQRIEK ALDGE