| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3740 |
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| Symbol | |
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| ID | 4457940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4562829 |
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| End bp | 4566158 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704513 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_847845 |
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| Protein GI | 116751158 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGACCC GCATCGGCGA GGAGCTTCAG GCAAATCTTG AGGTTGCGCG GGCAACCGCC
AGGAATTTCG AATCGTTCGT GCGGGATGTC GTCCACAGCG AACTCGTCCT CGGGCTGGCG
CTCACGGTCT CTCCGCCCAT GTCGGAAGCG GATCAACGTC GCCTGGTCGA GGAATTTAAC
GCGGATAATC CCGCCGTGTG GCGCGTTCAC TGGATCAACC CGGACGGCCA GGTGATTGCG
CCCAGTCCCG AAGACGTCAT CGGCATGGAT GTGAGCGATC GCCTGTTTTT CAAAAAGATC
AAGAGCGGGC GGGAGTGGTT CGTCAGCGAG GTTTTTTCCG GAAAGGTCAC GGGCCGGCAA
CTGTTCGTCA TCAGCCGCGC AATTCGCTCG GAACATGGCG AACTGGCAGG GATTGTGGCA
GCTGCCGTCC AACCGGCCGA CCTGGACTGG GTCATGGCCA TCAAGCGCCA TCAGGATGCG
GGCGTGAGCC TGGTGGACAG CAGGGGCATG CACGCGTATC GTTTCCCACC CATAAACTAT
ACCCCGGAAC AACGCGACTG GCTCAAGAGC TATCCCGCCA TCAAAGAGGC TCTCGCCGGG
AATGAAATCG CCACCGTCGT TACCTCCGTT TTAACCGGCA AAGAGCGCCT GGTCGCCTTC
GTCCCCGTTT TGGGCACTGG CTGGGTGGCG TCCGCGAGTC GCCTCCAGGA AGACGCCATG
GTTGCCATCA ATTCTGATCT GAGACACCAC AACCTGCTTT TTGCAGGTCT CATCCTGGTG
GTTTTTTGCG CGGTACTGTT CTTCTCGCGC TACATTGCCG CTCCCATCAA ACGACTTCGC
GATCAGGTAC TTCGCCAGGG TCCCGGAGAA TCGTGGGACT TCAAGGTCGA TACCGGCCCC
ACCGAGGTTA TCGAGCTTGC CTCGGCCTTC CGGATCATGT CCGAGAGGAT CAAAGCCCGC
GAATGGGAGC TCGGCAAGAG TGAAGAAAAA TTCCGCATCC TCTTTCATTC CATTCCCGAG
CCTTTGGCCC TGGCTATCGG CGACGATGCC GCCGTAGTCG ATGTGAATGA GTCCTTCTGC
CGGTTTTTGG GTCTCTCCCG TGCTGAGATT GAAGGCCGGC CCTTCATGGT TCTCGACATC
TGGCACGACC TGGAGGATCG CGACCAAATC CAGAATCTGC AGACGGCCGG CACCGAGGTC
CAGGACCTCG AATGCCGTCT GCGAACGCAA TCCGGCGCCG CGAAATACGT CCTGCTCTCT
ACGGCGAAGG TCGAAACGCA GACGCAGAAG GGCAGGCTCT TTATTCTGAA GGACATCACC
GCGCGCAAGG CCGCGGAGAT GGCCCTCCAG GGGCAGAGCA CAACACTGCA GACGATTTTC
GACGCCGTGC CGGCCTTGAT CTTTTATAAG GACTTGGAAA ACCGCCTGAT GCGCGCCAAT
CAATTGTGGT TCGAAACCTT TGGTCTGAGC GAAGCAGCCG TGATCGGCAA ATCCCTGGAC
GAATTCTTGC TGAAAGCGGA TGCGGAAAGG TTCTACCGCG ACGACCTGGA GGTCATCGCT
TCAAACCGGG CCAAGAAGGA TATCCTCGGG GAGATTCAGG TCAATGGCAA GACATTGTGG
CTCAAAACCC AGAAGATACC TTATCGGGAC AGCGCGGGTC GGGTGGTCGG CATCATCGGC
TTTTCCGAGA ACATCACCGC CGGCAAGCGA GCGGAGGATG AGCTGCTGGA GTCCCGACAG
CGGTTGTCGG ATATCATCGA TTTTCTGCCG GATGCCACCT TTGTGATGGA TGAGGAGGGG
ACAGTCATCG CCTGGAACCG GGCCATCGAG GAGATGACGG GGGTCAAGGC TTCGGAAATG
TTGGGTCGAG GCAACTACGA ATACTCTTTG CCCTTTTACG GTGTGAGGCG ACCTATCCTG
ATCGACCTGG TTCTCGATCA CGGATGCGAG TTTGCAGGCG AGTACCAGGG CATGACAATA
AAAGAATCGA TGCTCGAGGC GGAAGCATTT GTGCCAAGCC TGAAGGGGGA AAGAGCCTGT
CTTTACGGCA AAGCCAGCGT CCTGCGCAAT TCGAAGGGAA AGATCGTGGG GGCCATCGAA
TCAATCCGGG ATATCACCGA GCGCAAACGG GCGGAGGAGG AGAGGGAGCT TCTTGAGCTG
CAGTTGCGGC AAGTGCACAA GACCGAAGCC ATTGGTACTC TTGCCGGTGG CATTGCCCAC
GACTTCAACA ACATTCTCGG AATCATCATG GGTTATGCCG AACTCGCCAG GATGGAGTTC
CCAAGGGAAA CCACCGCGCG GGAGAGTATC GATGAGGTGC TGAAGGCAAC GCATCGAGCC
AAGGAACTGG TCAGACAGAT CCTTGACTTC AGTCGAACGC GCGAATACGA ACGGAAACCC
CTGCGACTGG TTCCGGTGGT CAAGGAAGTG CTGAAGCTCC TCAGAGCTTC CCTGCCGTCG
TCCATTGAAA TGGATCAGGC CGAAGAATTG CCGGCAGTTG GGGATCTGGT CCTGGCCGAT
CCCACTCAGA TCCACCAGGT GCTGATGAAT CTGGCGACCA ATGCGGCTCA CGCCATGCGC
GGGAAGGAGG GAAGGCTGCG CGTGGCGCTT TCCCCCGTTT CTTTTGACTC GCTTGATCCA
ACCAGACCGG TTGAGCTCAG CCCGGGAAAA TACCTTGACC TTGCGGTTGA AGATACCGGA
CATGGCATGA GCCAGGATAT CCTCGAACGG ATCTTCGATC CTTATTTCAC CACCAAGAAG
GCGGGCGAGG GAACCGGACT GGGATTGTCG GTGGCGCACG GGATTGTCAA GAACCATGGC
GGAGCAATCC GGGTCTTCTC CGAGCCTGGC CAAGGAACGG TCGTTCATGT GTATCTCCCG
GTGCTGGAGA GCGTGGAGCC GGTGGAACCA CCGGCACCCT CATCGACCCT TCCCGGGGGA
AACGAACGCA TCCTGCTCGT CGATGATGAA GAAGCCCTGG CCAAGGCCCT CAAGAAGAGG
CTCGAACGCC TGGGCTACCA GGTGACGGCA GTCACGGGCA GTCCGGAGGC CCTCGAAATC
TTCGGCGGGC AGCCGGAAGC CTTCGACCTG ATAATCACCG ATTACACCAT GCCGAAAATG
ACCGGGACGG AACTCGCCCG AGAGATCCTG AAGATCCGCT CCAGCATTCC CATCATCCTT
TCCACCGGTT TCAGCGAACG GCTCGATGAA GAAGAAACGG CGGCAGCGGG CATCAGCGCT
TTGATTATGA AACCGGTGAG TCTGAAGGGA ATCGCCGAGC TCATTTCGAC GGTGAGGAAG
GATCACGACA CCGGCTTCCT TTCCCCGTGA
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| Protein sequence | MQTRIGEELQ ANLEVARATA RNFESFVRDV VHSELVLGLA LTVSPPMSEA DQRRLVEEFN
ADNPAVWRVH WINPDGQVIA PSPEDVIGMD VSDRLFFKKI KSGREWFVSE VFSGKVTGRQ
LFVISRAIRS EHGELAGIVA AAVQPADLDW VMAIKRHQDA GVSLVDSRGM HAYRFPPINY
TPEQRDWLKS YPAIKEALAG NEIATVVTSV LTGKERLVAF VPVLGTGWVA SASRLQEDAM
VAINSDLRHH NLLFAGLILV VFCAVLFFSR YIAAPIKRLR DQVLRQGPGE SWDFKVDTGP
TEVIELASAF RIMSERIKAR EWELGKSEEK FRILFHSIPE PLALAIGDDA AVVDVNESFC
RFLGLSRAEI EGRPFMVLDI WHDLEDRDQI QNLQTAGTEV QDLECRLRTQ SGAAKYVLLS
TAKVETQTQK GRLFILKDIT ARKAAEMALQ GQSTTLQTIF DAVPALIFYK DLENRLMRAN
QLWFETFGLS EAAVIGKSLD EFLLKADAER FYRDDLEVIA SNRAKKDILG EIQVNGKTLW
LKTQKIPYRD SAGRVVGIIG FSENITAGKR AEDELLESRQ RLSDIIDFLP DATFVMDEEG
TVIAWNRAIE EMTGVKASEM LGRGNYEYSL PFYGVRRPIL IDLVLDHGCE FAGEYQGMTI
KESMLEAEAF VPSLKGERAC LYGKASVLRN SKGKIVGAIE SIRDITERKR AEEERELLEL
QLRQVHKTEA IGTLAGGIAH DFNNILGIIM GYAELARMEF PRETTARESI DEVLKATHRA
KELVRQILDF SRTREYERKP LRLVPVVKEV LKLLRASLPS SIEMDQAEEL PAVGDLVLAD
PTQIHQVLMN LATNAAHAMR GKEGRLRVAL SPVSFDSLDP TRPVELSPGK YLDLAVEDTG
HGMSQDILER IFDPYFTTKK AGEGTGLGLS VAHGIVKNHG GAIRVFSEPG QGTVVHVYLP
VLESVEPVEP PAPSSTLPGG NERILLVDDE EALAKALKKR LERLGYQVTA VTGSPEALEI
FGGQPEAFDL IITDYTMPKM TGTELAREIL KIRSSIPIIL STGFSERLDE EETAAAGISA
LIMKPVSLKG IAELISTVRK DHDTGFLSP
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