Gene Sfum_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3729 
Symbol 
ID4457929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4550061 
End bp4550624 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID639704502 
Productputative GAF sensor protein 
Protein accessionYP_847834 
Protein GI116751147 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAT TTGATGAAAA AGTCGCTCTC AGGAGTTTTC AGGAGATCAG CAAGCTTTTG 
AGCTCAACCA TGGAACTGCC GGAAATTCTC AATTACATAT TAGAAGAAAT CACCAGGGTA
TTGGGCCTGA AAGGGGGTAC CATCCGCCTC GTCAGCCCCA AGACCAATAC CCTGGAATGG
ATGGCCTCGG TTGGGGTGAG TCGGAAATAT GTCGAAAAGG GGGCGGTGGA CCTGGACAAG
AGCGTGGCGG AGGCCATGAC CGGAACACCG GTGCTCGTGC TGGACGCGGG CAACGACCCT
CGCATGCAGT ATCCGAAACA GGCCAGGGAG GAGGGCATCG CCAGCATGTT GACTATCCCC
ATGAAGGCGA GGGGGGGAAA GGTCATAGGA GTGATGCGCC TGGTGACCTC CGAGCCCAGG
CAGTTCACGA TGGATGAGGT CGATTTTGCC TGTGCCGTGG GAGAATTGGG AGCCCAGGCC
ATCACCAATG CCAGGATGTT CGAGGAGCTG ACCAAGGAGC TCAAATACTT CAAAGGCATG
GTGGACGTCG CCAAGTTTTG GTGA
 
Protein sequence
MSSFDEKVAL RSFQEISKLL SSTMELPEIL NYILEEITRV LGLKGGTIRL VSPKTNTLEW 
MASVGVSRKY VEKGAVDLDK SVAEAMTGTP VLVLDAGNDP RMQYPKQARE EGIASMLTIP
MKARGGKVIG VMRLVTSEPR QFTMDEVDFA CAVGELGAQA ITNARMFEEL TKELKYFKGM
VDVAKFW