Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3729 |
Symbol | |
ID | 4457929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4550061 |
End bp | 4550624 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639704502 |
Product | putative GAF sensor protein |
Protein accession | YP_847834 |
Protein GI | 116751147 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAT TTGATGAAAA AGTCGCTCTC AGGAGTTTTC AGGAGATCAG CAAGCTTTTG AGCTCAACCA TGGAACTGCC GGAAATTCTC AATTACATAT TAGAAGAAAT CACCAGGGTA TTGGGCCTGA AAGGGGGTAC CATCCGCCTC GTCAGCCCCA AGACCAATAC CCTGGAATGG ATGGCCTCGG TTGGGGTGAG TCGGAAATAT GTCGAAAAGG GGGCGGTGGA CCTGGACAAG AGCGTGGCGG AGGCCATGAC CGGAACACCG GTGCTCGTGC TGGACGCGGG CAACGACCCT CGCATGCAGT ATCCGAAACA GGCCAGGGAG GAGGGCATCG CCAGCATGTT GACTATCCCC ATGAAGGCGA GGGGGGGAAA GGTCATAGGA GTGATGCGCC TGGTGACCTC CGAGCCCAGG CAGTTCACGA TGGATGAGGT CGATTTTGCC TGTGCCGTGG GAGAATTGGG AGCCCAGGCC ATCACCAATG CCAGGATGTT CGAGGAGCTG ACCAAGGAGC TCAAATACTT CAAAGGCATG GTGGACGTCG CCAAGTTTTG GTGA
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Protein sequence | MSSFDEKVAL RSFQEISKLL SSTMELPEIL NYILEEITRV LGLKGGTIRL VSPKTNTLEW MASVGVSRKY VEKGAVDLDK SVAEAMTGTP VLVLDAGNDP RMQYPKQARE EGIASMLTIP MKARGGKVIG VMRLVTSEPR QFTMDEVDFA CAVGELGAQA ITNARMFEEL TKELKYFKGM VDVAKFW
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