Gene Sfum_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3720 
Symbol 
ID4457972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4535084 
End bp4536118 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID639704493 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_847825 
Protein GI116751138 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.071565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGCCC CGGTGAAGAC CACAAGGGAA ATGTTGCTCG AGCATTTGAA GCAGAGCGGC 
GGGAACTGGG TATCCGGCGC ATGGCTCAGT CGTGAATTGG GGGTCAGCAG AGCGGCGGTC
AACAAGCACG TGCGTCACCT GCAGAAGGTC GGCTACCCCA TCGCCACATC CACCAGGAAA
GGCTATCTCC TCGGCGGGCC GTTCGACCTC GTGCTGCCGG AGGAAATCCG GGACGGGTTG
CGGACCCGGA TCTTCGGCGC CGGGGAGATC GTCTACCTGG ACGCGACGGA TTCCACGAAC
CTGCGGGCAA AGGACCTGGC GGCGGGCGGA GCCTCCGAGG GGACCATCGT CATCGCGGAA
ATGCAGACGG CGGGGCGAGG GCGCAAGGGG AGGGGATGGT TTTCCCCACC GCGCCAGGGG
ATTTATGTTT CACTGATCCT TCGTCCGACC ATGACTCCGA GCGAAGCTCC GGGGATCACG
CTCATGACGG GTGTTGCGGC CGCCGAGGCG TTGCTTTCGC TCACGGACCT GGACGTCAGG
ATCAGGTGGC CGAACGACCT CATGGTGGGC GGGAGGAAAA TCGCCGGGAT CCTGACCGAG
ATCAGCACCG AAATGGATCG GATCGATCAT GTGGTCGTGG GACTCGGGGT GAATGTCAAC
AACCGTCACG AGGATCTTCA TCCCCAGATC CGGGAGTCGG CCACCTCCGT TCTCATCGAA
ACCGGGCAGG TCCTGGCGAG GGCCGGGCTG ATCCGGGCCA TCCTCGAACA TTTCGAAACG
TCCTACGCAA TCTTTTCGCA GAAGGGTTTC GAACCCTTCA GGCAGCGGTG GAAGGAGCTT
TCAGGCATCA TCGGGCGGTG TATCGTGGTG GAGATGATCG GCCGGACCCT GGCCGGGGAG
GTGCTCGACA TCGATCCCGA AGGGCTTTTG ATACTCAGGG ACGACGAGGG CTGCCGGCAC
CGGATCGTGT CGGGCGACGT GAGCGATCGG TCGGACGCAT CGAGGCCGGG ACGACGGGCG
CGGCGGCGGT CCTGA
 
Protein sequence
MGAPVKTTRE MLLEHLKQSG GNWVSGAWLS RELGVSRAAV NKHVRHLQKV GYPIATSTRK 
GYLLGGPFDL VLPEEIRDGL RTRIFGAGEI VYLDATDSTN LRAKDLAAGG ASEGTIVIAE
MQTAGRGRKG RGWFSPPRQG IYVSLILRPT MTPSEAPGIT LMTGVAAAEA LLSLTDLDVR
IRWPNDLMVG GRKIAGILTE ISTEMDRIDH VVVGLGVNVN NRHEDLHPQI RESATSVLIE
TGQVLARAGL IRAILEHFET SYAIFSQKGF EPFRQRWKEL SGIIGRCIVV EMIGRTLAGE
VLDIDPEGLL ILRDDEGCRH RIVSGDVSDR SDASRPGRRA RRRS