Gene Sfum_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3715 
Symbol 
ID4457967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4531342 
End bp4531986 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID639704488 
Productnitroreductase 
Protein accessionYP_847820 
Protein GI116751133 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0995943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC CGGGGGACTT TCTGGACGAA ATCACGAGTG GGAGAAGAAG TGTCCGGAAA 
TACCGGGCCG AGGTTCCCCC GCGCGGCGCG ATCGAAGCGA TGATCGAATG CGCGGCCAAA
GCCCCTTCCC CTTCCAACAG CCAGCCGGTC AGGTTTGTCC GGATCGTGTC GCCGCCGCTT
CTCGAAGCCC TGCACGGGGA GATGCTGCGG GCTCGCCGGG AGCTTCTGCA AAGGGTGGAG
GCGGAAGGCG GCTCCAAGAA AACCAGGAAC CTCGTCAACG CGTGCTTTCG CTGCTCGGAA
TTCATGTTCC GGGCGCCCGT GCTCATTGCC GCCGGCACCG TTCCCGTTCA CGCCGGATTC
TCTTCGAGGC TCGCCGAAGC GAAAATCCTC CGGGCGGATC GCCGAGGCGA GAGGGACCTC
GACATCACTT TGGGATTGGC TCTTAAGGGA TTTCTCCTCA AAGGCCGGGC GCTCGGACTC
GGAACGTGCA TTCTCACCGC TCCGCTGCTG TTTCTTTCCG ACGTGCGGAA GACTCTCGGA
TTGGAGGATA TCCGCATCAG CTGTTTCGTC ACAGTGGGAT TCCCCGACGA TACTCCGCCC
TTCATCGAGC GGAAAAGCGC GGCGGAGCTC TACAGGGAGA TTTAG
 
Protein sequence
MNQPGDFLDE ITSGRRSVRK YRAEVPPRGA IEAMIECAAK APSPSNSQPV RFVRIVSPPL 
LEALHGEMLR ARRELLQRVE AEGGSKKTRN LVNACFRCSE FMFRAPVLIA AGTVPVHAGF
SSRLAEAKIL RADRRGERDL DITLGLALKG FLLKGRALGL GTCILTAPLL FLSDVRKTLG
LEDIRISCFV TVGFPDDTPP FIERKSAAEL YREI