Gene Sfum_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3700 
Symbol 
ID4457987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4516165 
End bp4516833 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID639704473 
Productformylmethanofuran dehydrogenase, subunit E region 
Protein accessionYP_847805 
Protein GI116751118 
COG category[C] Energy production and conversion 
COG ID[COG2191] Formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG CGGACGCTGA CTTTCAGAGG CTTCTCGACG AGGCGGTGAA ATTCCATGGG 
CACCTGTGCG GCGGGCAGGT CATCGGTGTC AGGATGGCCA TGGCCGGTTT GAGGGAGCTC
GGCATCAAGG AGCCCAGGGG AAAGGAGGGC AGGGACCTGG TCATTTTCGT CGAAATCGAC
CGCTGCGCGA CCGATGCCAT CATATCCGTC ACCGGGAGGA CGCCGGGCAA GCGGAGCCTC
AAGATGCTGG ACTACGGGAA GATGGCGGCG ACATTCGTCA ATGTGGGAAC CGGCAAGGCG
GTGAGGATCA GCGTCCGGGC GGATTTGGAC GAGAAGGTCC GGCGCATCGC GCGGGCGAAT
GAGACCGCGG AAAGTGAGGA AGCGGCATAT CTTGCCGCTC TGGCCGCCAT GCCGGAGGAG
GAGGTTCTCA AAATCGGCCG GGTGATCGTC AACATCCGGC CGCGGGATCT TCCCGGCAAG
CCCCTCAGCA GCGTGATCTG CGAGCGTTGC GGTGAGGCGG TGAGGGACAT GAGGGAGGTT
TATCGATGGG GCAGAATCCT GTGCCGGCCG TGCGCCGACA GACAAACGTA CTACGCCCTG
GAAGACGGAA GACCCGCGAC GGGTGCTTCG AGGACATCGC GCGGAAGGGT TCGGAAAGGG
AGCGCATGA
 
Protein sequence
MENADADFQR LLDEAVKFHG HLCGGQVIGV RMAMAGLREL GIKEPRGKEG RDLVIFVEID 
RCATDAIISV TGRTPGKRSL KMLDYGKMAA TFVNVGTGKA VRISVRADLD EKVRRIARAN
ETAESEEAAY LAALAAMPEE EVLKIGRVIV NIRPRDLPGK PLSSVICERC GEAVRDMREV
YRWGRILCRP CADRQTYYAL EDGRPATGAS RTSRGRVRKG SA