Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3689 |
Symbol | |
ID | 4458011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4501856 |
End bp | 4502497 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639704462 |
Product | TetR family transcriptional regulator |
Protein accession | YP_847794 |
Protein GI | 116751107 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA AAGAACAGAT CATTCACCAG TCTATGAGGC TCTTTTCTCT GCACGGTTTC CTCAACACGT CCATGCGCGA CATTCTGGAG GCCGCAAACA CGTCCAAGGG CGGTTTCTAC AATCACTTCA AAAGCAAGGA GGACCTGCTT TTCGCCGTGC TGGGGGAAGC GCGAAGACTT TGGAAGGAAC GGAGCCTGGC AGGCCTGGAC CAGACCGGAA GCGCCGTCGA AAAGATCAGG AAGTTCCTCA CCAACTACCG GGACAATTAC CTCGGGGACA GGGACAGTAT TCCCGGAGGC TGCATCTTCG TGGCGCTGGC CATGGAGTTG GCCGATCAGA AACCGCATCT GGCCCGGGAA GTGAGCGAAG GGATGTCGGG CCTGAAAAGG ATGATTCTGC GTATATTGAA AGAGGGGATA GCATCGGGAG AAATCAGGGA AAATGTGAAC GCGCAAGCTG CTGCCGAGCT GATTTTCTCG GGACTGTTGG GCGCCTCTCT CATTTACAGT GTGGACAAAT CGATCGAGAA CCTGGACCGA TCCATCGGCA TCTTCATCGA CTATCTCGAC GGGCTGTCCC CTTTGAATCC ATCGGCAAGA ACGCAAGGAA CCGGTCCACC GAAGCATGAG AGGAGGAAAT GA
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Protein sequence | MRLKEQIIHQ SMRLFSLHGF LNTSMRDILE AANTSKGGFY NHFKSKEDLL FAVLGEARRL WKERSLAGLD QTGSAVEKIR KFLTNYRDNY LGDRDSIPGG CIFVALAMEL ADQKPHLARE VSEGMSGLKR MILRILKEGI ASGEIRENVN AQAAAELIFS GLLGASLIYS VDKSIENLDR SIGIFIDYLD GLSPLNPSAR TQGTGPPKHE RRK
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