Gene Sfum_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3688 
Symbol 
ID4458010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4500708 
End bp4501859 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content61% 
IMG OID639704461 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_847793 
Protein GI116751106 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGG ATTTCAGGTT TTCCGAACGG GAAGAGATGT TACGGAAATT CGTCAGAGAA 
TTCGCCGAGA ATGAAATTCC TCCCAAAATG GAGTCCATGG AAACCAACGG GAAGTTCCCG
ATCGAGCTTA TGCCTTTCAT GGCCCAGATC GGGATCACCG GGATCATCAC GCCCACGCAA
TACGAAGGGG TGGGGCTGGG CTACGTCGCC CGCACCATTG TCCTGGAGGA GCTGGGCCGG
GTCTGTGCCG CAGTTCCGAT GGCCATGCAG GTTCATCATA TGGCGTGCGC GGCGCTGGCC
GATTTCGGCA ACGAGACTCA GAAGAAGAAG TACCTGCCTC GTCTTGCGCG GGGCGACACA
ATGGGATGCG TGGCGGTCAC GGAGCCGGGC GGCGGATCGG ATGTGGCGGG CACGAAAACC
ACGGCCGACC TGAAGGGAGA CAAGTACATC ATCAACGGCC GCAAGTGCTT CATCACCAAC
ACCCACACCT CGGACTTCTG GGTGGTGATC GCCCGGACCG GTGAAGGAGC GAAGGGCCTG
AGCGCTTTCG TCGTCGACAA GAATGCGCCG GGAGCCAGGG TCGGCCGCGA GGAAAACAAG
TTCGGCATGC GGGGAGCCAA TACGGGAGAG CTCGTGTTCA ACGACTGCGA GGTTCCGCGG
GAAAACCTCC TCGGGCAGGA GGGGGGAGGA GTCGGCGTGG CCATGAAGAC CGTCAGCGAG
ACGGGAAGGA CGGGCATGGC CGCGGTGGCT TTGGGCATCC TCACCTGTGC GTACGAGGAG
GCCGCCAAAT TTGCCCAGGA ACGCGTCCTG TACGGCAAGC CCATCGCCAC GCTCCAGGCC
ATCCAGTTTT ACATGGCCGA AATCTTCGCC CAGCTCGAGA TCGCCCGGCT TCTGTGTTAC
AGGGCCAGTT GGATGAAGGA CAACAACCTG CGCTTCGACA CCGAATCCGC GCTGGCCAAG
TGGTACACGT GCGAAGCGGC GGCGACGGCG GCCAAGCGGG CCGTCGAAAT CCACGGCTCG
TATGGAATCA TGAAAGAATA CACCGTGCAG CGTCTGTTGA GGGACGCCAT GGTGACCATT
CCGGCCGGGG GAACCGGCGA AATCGGCAAG CTGGTTCTCG GCCGCGCGGC GCTGGCCCCG
TTCAAGAAAT AG
 
Protein sequence
MTMDFRFSER EEMLRKFVRE FAENEIPPKM ESMETNGKFP IELMPFMAQI GITGIITPTQ 
YEGVGLGYVA RTIVLEELGR VCAAVPMAMQ VHHMACAALA DFGNETQKKK YLPRLARGDT
MGCVAVTEPG GGSDVAGTKT TADLKGDKYI INGRKCFITN THTSDFWVVI ARTGEGAKGL
SAFVVDKNAP GARVGREENK FGMRGANTGE LVFNDCEVPR ENLLGQEGGG VGVAMKTVSE
TGRTGMAAVA LGILTCAYEE AAKFAQERVL YGKPIATLQA IQFYMAEIFA QLEIARLLCY
RASWMKDNNL RFDTESALAK WYTCEAAATA AKRAVEIHGS YGIMKEYTVQ RLLRDAMVTI
PAGGTGEIGK LVLGRAALAP FKK