Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3682 |
Symbol | |
ID | 4458004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4495080 |
End bp | 4495739 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704455 |
Product | hypothetical protein |
Protein accession | YP_847787 |
Protein GI | 116751100 |
COG category | [S] Function unknown |
COG ID | [COG2930] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA TTTTTTGCGC CGCACTGGTG TTCGCATTGG TCGCACCATT CTTACCCACC GTCGCTTTTG CCGACATGCA GGATGATGTC AATCAAGCCG TCACCATTTT CCAGCGCTTC CAGGACATCC CCGAGCAGTC CGTGCCCAGG TCGGTTCTCA AGGATGCCAG GGGCATCGCC ATACTGACGG TCTTGAAAGC CGGTTTCATC TTCAGCGGCC GTGGTGGTCA TGGCGTGGTG GTGGCGCGGA CCCGGAAGGG ATGGAGCGGA CCGTCGGCAA TCGGCACGGG CGGCGCAGGA TTCGGCCTGC AGATTGGAGC GCAGGTGACC GAGTTCGTGA TGATCCTCAA TACGGCTGAG GCGGTGAATG CGTTCTCCAG GGAAGGCAAC ATACAGCTGG GCACCGATCT GAGCGTCGCG GCCGGCCCCG TGGGCCGCAC CGCCGCGGTG GGGATAACTC CGATGGCCGC GGTGTACACC TACAGCCGAA GCCAGGGGAT TTTCGCCGGG ATCTCCCTCG AGGGTACCGT GGTCGTCACC AGGAAGGATG CCAACGCGGC CTACTACGGC AGGTCGGTCG TCGCCGGCGA TATTCTGGCC GGAAAGATCA AACCTCCCGC GGGAGCGAGG CGGCTCGTGC AGGTTCTCTC GAGATATTAG
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Protein sequence | MKSIFCAALV FALVAPFLPT VAFADMQDDV NQAVTIFQRF QDIPEQSVPR SVLKDARGIA ILTVLKAGFI FSGRGGHGVV VARTRKGWSG PSAIGTGGAG FGLQIGAQVT EFVMILNTAE AVNAFSREGN IQLGTDLSVA AGPVGRTAAV GITPMAAVYT YSRSQGIFAG ISLEGTVVVT RKDANAAYYG RSVVAGDILA GKIKPPAGAR RLVQVLSRY
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