Gene Sfum_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3682 
Symbol 
ID4458004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4495080 
End bp4495739 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID639704455 
Producthypothetical protein 
Protein accessionYP_847787 
Protein GI116751100 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA TTTTTTGCGC CGCACTGGTG TTCGCATTGG TCGCACCATT CTTACCCACC 
GTCGCTTTTG CCGACATGCA GGATGATGTC AATCAAGCCG TCACCATTTT CCAGCGCTTC
CAGGACATCC CCGAGCAGTC CGTGCCCAGG TCGGTTCTCA AGGATGCCAG GGGCATCGCC
ATACTGACGG TCTTGAAAGC CGGTTTCATC TTCAGCGGCC GTGGTGGTCA TGGCGTGGTG
GTGGCGCGGA CCCGGAAGGG ATGGAGCGGA CCGTCGGCAA TCGGCACGGG CGGCGCAGGA
TTCGGCCTGC AGATTGGAGC GCAGGTGACC GAGTTCGTGA TGATCCTCAA TACGGCTGAG
GCGGTGAATG CGTTCTCCAG GGAAGGCAAC ATACAGCTGG GCACCGATCT GAGCGTCGCG
GCCGGCCCCG TGGGCCGCAC CGCCGCGGTG GGGATAACTC CGATGGCCGC GGTGTACACC
TACAGCCGAA GCCAGGGGAT TTTCGCCGGG ATCTCCCTCG AGGGTACCGT GGTCGTCACC
AGGAAGGATG CCAACGCGGC CTACTACGGC AGGTCGGTCG TCGCCGGCGA TATTCTGGCC
GGAAAGATCA AACCTCCCGC GGGAGCGAGG CGGCTCGTGC AGGTTCTCTC GAGATATTAG
 
Protein sequence
MKSIFCAALV FALVAPFLPT VAFADMQDDV NQAVTIFQRF QDIPEQSVPR SVLKDARGIA 
ILTVLKAGFI FSGRGGHGVV VARTRKGWSG PSAIGTGGAG FGLQIGAQVT EFVMILNTAE
AVNAFSREGN IQLGTDLSVA AGPVGRTAAV GITPMAAVYT YSRSQGIFAG ISLEGTVVVT
RKDANAAYYG RSVVAGDILA GKIKPPAGAR RLVQVLSRY