| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3666 |
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| Symbol | |
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| ID | 4458023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4474344 |
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| End bp | 4476044 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704439 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_847771 |
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| Protein GI | 116751084 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGT CTTCTTCATT GCTCAGTGCT TTCCGGCGGG AGTTCAACCT GCAGGAGGAG
CAGGTCTGTC AGTTGCGCGA TGCCTATTTC ATGGAGGGAT TGCCTCTTGC GGACGCCTTC
GAGCAGATTT CGGTGACCGA TGAGAACCGC ATCCTCCGCG TTCTGTCCCA GCATTTCGGG
ATCCCGCTGC TGGAGCGTGA AGATTACCCG GAGAAACCAG TGCTCCTCGA GGGCGTTTCC
ATGGTTTTTC TGCGCAAGCA CGCCGTCCTC CCCATCCAGA TCGAAAGCGG CAAGGTGAAG
GTAGTGGTCA ACAATCCCTT GAACCTGCCG GTGCTGAACC TCCTGGGCGG TTACTTCGCC
GACATGAAAC TCAGTCTGTG CCTTGGGCAG CGGGAGGAGA TCCGAACGGC CATCGACCGG
CTGTACGGGA CCGCGGCAAG GGAGGCCGAA GAACAGTCCC GCTCCGGTGA AGGAGCGGTG
CTCAACGGCA GCGCTTTCGA GGAGGATCTC GAGCACCTGA GGGGATTGGC CCAGGAAGCG
CCTATCGTGA GGCTCGTCAA CGTCCTGATC TCGCGCGCGC TCGACATGCG GGCATCCGAC
ATTCATTTCG AGCCGTTCGA GCGCAGTTTC CAGGTCCGAT GCAGAGTCGA CGGTGTGCTC
TTCGACCTCG ATCAACCTCA GAAGAGCATG CAGGCGGCGA TCGTCAGCCG CCTCAAACTG
ATGGCCAACC TCAACATCGC TGAACGCAGG CTGCCCCAGG ACGGCAAGAT CAAGCTCAAG
TTCGGCAACC GCGAGGTCGA CATCCGCGTT TCGACCGTTC CGACCATATA CGGAGAGAGT
ATCGTCCTCC GGCTCCTGGC TCAGGAGGGG GTCGAATACA ATCTGGCCAA CCTGGGCATG
GACGGGGAGG ACCTCGCCTA CCTGGAACAG CTTGTCGAAC GGCCTTTCGG TATGATCCTC
GTCACCGGCC CGACCGGTTC CGGCAAGACG ACCACCCTTT ACGGGGTCCT CAAAAAACTG
AATTCCGTGG TGAGAAAAAT CATCACGGTC GAGGATCCCG TCGAATACCA GATCAACGGC
ATCAACCAGA TCCAGGTCAA GCCTCAGATA AACCTCACCT TCGCCAACGC GCTCAGGTCT
CTTGTCCGGC AAGACCCGGA CGTGCTTCTG ATCGGAGAAA TCCGGGACAA GGAAACGGCC
GACATCGCCA TCGAATCGGC TCTCACCGGT CACCTGGTGT TGTCGACCCT TCACACGAAC
GACGCGCCGG GCGCCATCAC ACGGCTCCGG GACATCGGGA TCGAGTCTTT TCTGATGGCC
GACTCCCTTC TGACGGTTCT CGCCCAGCGC CTGGTGCGTG TGCTCTGCCC TCATTGCAAG
GAACCTTACA CTGCGCGCGA AGCCGATTGG AACCGTCTCA ACGAGATCAT TCCCGACCTG
CCTCGCTCCC TTACGCTTTG CCAGAACAAG GGCTGCGATC GATGCGGCTA CACCGGATTC
AGGGGCAGAC AGGGAATCTT CGAGGTGCTC AAGGTGAATG AGAGCGTCCG ATCGGCGATC
GTCGCCGGGA AGGATGCCGG GAGCATTGCC CCGATCGCCT TCGAATCGGG CTACCGACCG
CTTTTGCACC ATGGCTATCG GAAGGTGATC GAAGGCATTA CGACGCTCTC GGAGGTGCTG
AGGGTGACAA GCCTGTCATG A
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| Protein sequence | MSESSSLLSA FRREFNLQEE QVCQLRDAYF MEGLPLADAF EQISVTDENR ILRVLSQHFG
IPLLEREDYP EKPVLLEGVS MVFLRKHAVL PIQIESGKVK VVVNNPLNLP VLNLLGGYFA
DMKLSLCLGQ REEIRTAIDR LYGTAAREAE EQSRSGEGAV LNGSAFEEDL EHLRGLAQEA
PIVRLVNVLI SRALDMRASD IHFEPFERSF QVRCRVDGVL FDLDQPQKSM QAAIVSRLKL
MANLNIAERR LPQDGKIKLK FGNREVDIRV STVPTIYGES IVLRLLAQEG VEYNLANLGM
DGEDLAYLEQ LVERPFGMIL VTGPTGSGKT TTLYGVLKKL NSVVRKIITV EDPVEYQING
INQIQVKPQI NLTFANALRS LVRQDPDVLL IGEIRDKETA DIAIESALTG HLVLSTLHTN
DAPGAITRLR DIGIESFLMA DSLLTVLAQR LVRVLCPHCK EPYTAREADW NRLNEIIPDL
PRSLTLCQNK GCDRCGYTGF RGRQGIFEVL KVNESVRSAI VAGKDAGSIA PIAFESGYRP
LLHHGYRKVI EGITTLSEVL RVTSLS
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