Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3660 |
Symbol | |
ID | 4458017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4468625 |
End bp | 4470154 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639704433 |
Product | fimbrial assembly family protein |
Protein accession | YP_847765 |
Protein GI | 116751078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGG GTCTTGTCAA GCATCGTCCC GGGAATCTTC TGGCGGTCTA TGTCGAGCCC GGTCAGATTG AGCTCCTGCG TGCATACCGG CAGTGGCGAA CATGGAAGAT CGACTCCACG GAGCGCTTCG CGATTCCCGA GGGGGAACCC GTCCATGAAT TCCTTCAGCG CCTTAATTTG CGGCCCCGCG GAAAAAGAGC CGGAGCCCTG GTTCTGTTCC TTTCCCGCAG TTACTACACT TTCCATCGCG AACACTACCC CGCCGCGCTC CAGGAGCAGT TGGAGGAAGC ACTGAACTTC GACTGGCAGG AAAATGTCTT TCACGAGCAG GACCGGACCC TGCATTTTTT CGGTCCTGCC GTGCTCGTCG ACAGCCAGCT CTCCGTCCCG ATCTTTTCGA TACAGAGGGA TGTCTATGAC AAGTTCTACC AGGCGCTGGG CGGTGGGGTT TACGACAGCT TCTCGGTAAT CCCCGGCGCC CTGATGTACA AGGCGTTTGT CCCGGAACTG CGCGCGGAAG AGGACGTCTT TCCCATCGAG ATCATGGGGC GCATCATCGA CCCTGAGCAT GTCGAGATGC ACCGCTTTTA CAACGGGTTT CTCCTCGATT CCACGTTGCT CGGCAGGAAC TGGGACAATC TCGGGCTTTT CCGGGAAAGC CTGCTTTGCC TGGGAGAAGG TCCGGACCGG CAGGAAGTCC GCATCCATCT GCTTTGCTCG GATGAGGAGT GCAACGACAC CGAGAGCTAC GGCCGGGAAT GGAGGAACGA GAAGCTCCCG ATGGGCGTCC ATCCGGTCGA AGAAAGCCTT GTTCACCAAT GGGTGCGATA CATCCTGGAA CAGGATAGCG TTCGAACGTT CGAGACGGAA CTGGTGCTCA AACCCTGGCA GGTGCCCAAG GTTGCCTACC CCGTGCTGGC GCTCGTCGCC GTTTTCACCG CCTTTTCCTT CTACCAGGTG TATGCCGCAA ACCGGCTTGT GGAAGACAGC AAACGGCTTC AGAAACAGGT GCTTCAGCTG GAAACGCAGT GGAAGCCCAT CGAGGAGCTC CAGAACCGGA TCGCCAAGTT CGAGCAGGAC CAAAAGACCC TCACCCAGTT CAATCAGCAA GGCTACCCCA TCCTGGAGGT TCTCAGTTTC CTCACGCAGG TGACGCCTGA AGATACCTGG CTCAATTACC TGTCCATCAA GAAGGGACAG TTGATGCTGA GGGGCGAGAG CAAATCCGCC ATCAAGTATC TGTCCGAGCT CTCCAAGGTC GATGGGCTGG CGGACGTGCG ATTTGCCTCG CCCGTCACCA AGAATCCTTC TTCGGACATG GAACGGTTCA ACGTGCAGGT CCAGATCGAA TCCGAGAAGA TGATGAAAAC CCTCGAAGCA CTGCCGCCGG AAAAGCCCGA CGACCAGGCG CCGAGCGTCG CTCCGGCGCC CGCATCCACA TCTCCTCCGG TCGGAAAATC GGCCCCCAGG CGCCAGTTGC CGGACGAGGA GGCCGTGGAT GAGGACTTCG CCCCGGAAGA GGACGAATAG
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Protein sequence | MLKGLVKHRP GNLLAVYVEP GQIELLRAYR QWRTWKIDST ERFAIPEGEP VHEFLQRLNL RPRGKRAGAL VLFLSRSYYT FHREHYPAAL QEQLEEALNF DWQENVFHEQ DRTLHFFGPA VLVDSQLSVP IFSIQRDVYD KFYQALGGGV YDSFSVIPGA LMYKAFVPEL RAEEDVFPIE IMGRIIDPEH VEMHRFYNGF LLDSTLLGRN WDNLGLFRES LLCLGEGPDR QEVRIHLLCS DEECNDTESY GREWRNEKLP MGVHPVEESL VHQWVRYILE QDSVRTFETE LVLKPWQVPK VAYPVLALVA VFTAFSFYQV YAANRLVEDS KRLQKQVLQL ETQWKPIEEL QNRIAKFEQD QKTLTQFNQQ GYPILEVLSF LTQVTPEDTW LNYLSIKKGQ LMLRGESKSA IKYLSELSKV DGLADVRFAS PVTKNPSSDM ERFNVQVQIE SEKMMKTLEA LPPEKPDDQA PSVAPAPAST SPPVGKSAPR RQLPDEEAVD EDFAPEEDE
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