| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3653 |
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| Symbol | |
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| ID | 4458044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4460796 |
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| End bp | 4461395 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704426 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_847758 |
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| Protein GI | 116751071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00224871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATTG AATTGGTTGC GCAAACCAGG ACGAAAAGCG GCAAGGGACC CGCAAGGGCG
TTACGACGCA ACGAAATGGT GCCCGCGGTT CTGTACGGTC CCAAGGCGGA AACGGTCTCT
CTTTCGGTAC CCAGGCAGAG GCTGGAACGG CTGCTCCGCG ACATGGGGGA GGAAAGCAAG
TTGCTGCGCC TGACCGTCGA GGGCGACGGA ACGGCGGAGA TGAAACAGGT TCTGATCCGG
GAAGTCCAAG TCCATCCTGT GCGCAGGCGC TTTCTGCATG TCGATTTCTA CGAGGTCCCG
CTCGATCATC CGATCGTGGT CGAGGTGCCG GTGGAGCTCT TGGGTGAGCC CGTCGGAGTG
AAGAAGGGCG GAACGCTGAA TCTCATTCAA CGCATGCTGT CGGTTCGCTG CCTGCCGGGG
GAGATTCCTG AGAAGGTGCA GGTTGACGTG AGCAAGCTGG ACATCGGGTC GTCGATCCAG
GTCGAGCAGC TTCGGACGAT CGTGCCTTTT GAGCTTACGG ACGACGGTGG GATGGCGGTT
GTCAACGTGG TTGCTCCTGA AGGCGCCGGA AAAGAAGACG CAGAAGCTGC GGAAGAATGA
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| Protein sequence | MDIELVAQTR TKSGKGPARA LRRNEMVPAV LYGPKAETVS LSVPRQRLER LLRDMGEESK
LLRLTVEGDG TAEMKQVLIR EVQVHPVRRR FLHVDFYEVP LDHPIVVEVP VELLGEPVGV
KKGGTLNLIQ RMLSVRCLPG EIPEKVQVDV SKLDIGSSIQ VEQLRTIVPF ELTDDGGMAV
VNVVAPEGAG KEDAEAAEE
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