Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3649 |
Symbol | |
ID | 4458039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4456716 |
End bp | 4458296 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639704421 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_847754 |
Protein GI | 116751067 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0277903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.752498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTC TGGTCAGCGA TAACCTGGCT GAGTCGGGCG TTGAGAAGCT CAGAAAGGTT CAACAATTTG AAGTGGATGT GAAAACCGGT CTGACGCCCG ACGAACTCCG CGGGATCATC AAGGACTACG ACGGCCTGGT GATCCGTAGC GCGACCAAGG TGACCCGGGA CATCATAGAC GCTGCGGACA ATCTCAAGGT TGTGGCCAGG GCGGGCATCG GCCTGGACAA TGTCGACGTC GAAGCCGCCA GCAAGCGCGG GATTGTGGTG ATGAACACCC CGGAAGGGAA CATCGTCACC ACCGCGGAAC ACGCCATCGC CATGATCCTG GCGCTTAGCC GGAGCATTCC CCAGGCCACC AATTCCATCA AGAGCGGCAA GTGGGAGAAG AAACGTTTCA TGGGCCGGGA GGTGTTCAAC AAAGTACTCG GTATCATCGG GATGGGACGC ATCGGGCGCA TTGTGGCCGA TCGGGCCAAA GGTTTGAAAA TGAACGTCAT CGCCTTCGAC CCGTACATCA GCTCCGAGGT GCTGGAGTCT TCGGGCATAG AGGCGGTCGC CCTCGACGAC CTGCTGACGC GCTCCGACTA CATCACCGTC CATACGCCGA TGACGCCGGA AACCCGGGAC ATCTTGAACG CAAAAGCTTT CAAAAAGATG AAGGAAGGTG TTTTCGTCAT CAACTGCGCC AGGGGAGGCA TCGTCAACGA ACAGGATCTC CATGACGCCA TACGGGCCGG GATCGTGGCC GGTGCGGCTC TCGACGTTTT CGCTCAGGAA CCGCCCAAGG ACAACCCTCT CCTGGCCCTC GACAGCGTCA TCGCTACGCC GCACCTGGGG GCATCCACGG ACGAGGCGCA GGAGAACGTC GCCATCGCGG TGGCGGACCA GGTCATCGAT TTCCTGGTGC GCGGCACCAT AAGGAATGCC GTGAACGCCC CCAATATCGA CGGCGCCGTG CTCGCCCGGC TTCGTCCCTA CCTGAAGCTC TCCGAGAAGC TTGGTTCCGT CCTCACTCAG ATCACCCGGG GAGCCATTCA AAAGGTATCC ATCGAATACA TCGGGGAAGT GGCGTCCATG GAGACCCAGC CTTTGACCTA TTCCATACTG AAGGGGATGC TCACCCCGAT AATGGGAGAT ATGGTCAACT TCGTGAACGT TCCGGTCCTT GCCCGCGAGC GGAACATCAA GGTGACGGAA TCCGTGCGCA GCGAGGCCGA GGACTTCACC AACCTGATCG GCATTCACGT GAAAACCTCG GAAGAAGAGA ACCTGGTGGC AGGGTCGTTC TTCGGGAAGA AAGACCCCCG CATGGTCAGG ATCAACGATT TCCGCCTGGA GGCCGCCCTC GAAGGTCACC TGCTGCTCAT TTACAACATC GACACTCCCG GCACCATCGG AGCGATCGGG ACCTGTCTCG GGAAACACCA CATCAACATC TCCATGATGG ATGTCGGACA GGTGCTCGAA CGCGGTCAAA ACATCATATT CCTTCGGACC GACACTCCCG TTCCGGGCCA CGTGAAGGAG GAACTGCTGG CCATGGACAA TGTGAACGTC GTTCAGGCCA TTGAACTTTG A
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Protein sequence | MKILVSDNLA ESGVEKLRKV QQFEVDVKTG LTPDELRGII KDYDGLVIRS ATKVTRDIID AADNLKVVAR AGIGLDNVDV EAASKRGIVV MNTPEGNIVT TAEHAIAMIL ALSRSIPQAT NSIKSGKWEK KRFMGREVFN KVLGIIGMGR IGRIVADRAK GLKMNVIAFD PYISSEVLES SGIEAVALDD LLTRSDYITV HTPMTPETRD ILNAKAFKKM KEGVFVINCA RGGIVNEQDL HDAIRAGIVA GAALDVFAQE PPKDNPLLAL DSVIATPHLG ASTDEAQENV AIAVADQVID FLVRGTIRNA VNAPNIDGAV LARLRPYLKL SEKLGSVLTQ ITRGAIQKVS IEYIGEVASM ETQPLTYSIL KGMLTPIMGD MVNFVNVPVL ARERNIKVTE SVRSEAEDFT NLIGIHVKTS EEENLVAGSF FGKKDPRMVR INDFRLEAAL EGHLLLIYNI DTPGTIGAIG TCLGKHHINI SMMDVGQVLE RGQNIIFLRT DTPVPGHVKE ELLAMDNVNV VQAIEL
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