Gene Sfum_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3645 
Symbol 
ID4458035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4452376 
End bp4453080 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID639704417 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_847750 
Protein GI116751063 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000949646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.496718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGC GCATCGGCAT AATGGGAGGG ACCTTCGATC CCGTTCATTT CGGTCACCTT 
CGAGCAGCGG AAGAAACCGT CGAGGCCCTG GAGCTTGACG CCCTTTACTT CACTCCCGCC
GCCACGCCGC CTCATAAGGG GGGTAAAGCG ATCCTGGACT TCGATCATCG CCGGCGAATG
CTCGAACTCG CCATCCAGGA TCACCCGAAA TTCGCCCTGT CCGACATCGA ACGCAAGCTT
CCCGGCAAAT CCTACACGGT GGTGACCCTG CGCAGATTGC TCCAGGACTG GGCAAACGGC
GTGGATCTCT ATTTTCTCGT CGGACTGGAC GCGTTTCTTG AACTGAACAC CTGGTGGCAC
TTTCAGGAGC TTTTCGAGCT GGCCCGCATG TGCGTCCTCA GGCGTCCCCC TTATGACGAG
ACGGCCATCG AGGCGTTCCT GCGTTCCAAG GTGTCTCCCG ACTACGCCTG GGAGCCCGGC
GCGCAGGCGT TCGCGCACCC CGGCCTGCTC CCCGTCCACT ATCTGTGCAA TACGCACCTG
GAGATTTCAT CGACACGGAT TCGAGAATTG GTGGCGCGGG GGCGTTCCAT CAGGTATCTG
GTTCCGCCGC AAGTTATGCG TTATATTTTT CAGAATAAAC TGTATGCAGG CTGGAACGCC
GGCGTTGAGA CCGTTGGGGA AATGATGCAA CATGACGCAA CCTAA
 
Protein sequence
MRQRIGIMGG TFDPVHFGHL RAAEETVEAL ELDALYFTPA ATPPHKGGKA ILDFDHRRRM 
LELAIQDHPK FALSDIERKL PGKSYTVVTL RRLLQDWANG VDLYFLVGLD AFLELNTWWH
FQELFELARM CVLRRPPYDE TAIEAFLRSK VSPDYAWEPG AQAFAHPGLL PVHYLCNTHL
EISSTRIREL VARGRSIRYL VPPQVMRYIF QNKLYAGWNA GVETVGEMMQ HDAT