| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3632 |
|---|
| Symbol | |
|---|
| ID | 4458055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4442631 |
|---|
| End bp | 4443512 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639704404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847737 |
|---|
| Protein GI | 116751050 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.101055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATAGCCA GCATGACGGC ATTCGGACGA ACCCAGAAAG AAACCTCGGG ATATTCGATC
ACGGTCGAGG TCAGGACGCT GAACGGTCGA GGCCTGGACA TCGTTCCGAG GCTGCCGAAG
AATTTCCTGG AATTTGAGGA CGCCTGTCGA AAGCTGGTCT CGCAGAGCTT GCGGCGTGGG
CGCGTGGAGG TTTTCGTCCA GATCGAATCG ACCAGCCCCG AGCTGAAGGC CCCCCGCCTC
AACCTGCCTT TGGCGCGTCA CTACTGGGAA CAATTGATGG AATTGCACCG GTCGCTCCCG
GCCAGCGCGC CCCCGATGCT CGACAGCCTG CTCCGTGTGC CGTACCTGTT CGAAGCCCGC
GAGGACGATC CCGACCGGGA GCTCATCCGG GAACTGCTCA CGGGCGCATT GTCGGAAGCC
CTGGAACAGG TTCGATCCAT GCGGCTGGTG GAAGGCGAAT CCCTGCGCAA AGACTGCCTG
GAACGCCTCG AAGTCCTGGC CCGCGATCTC GCCCTGATCG AAAGCCGCAA GGATCTGGTC
GTTCTGGAGT ATCAGCAGAA GATACGGGAC CGAATTCAGG AGTTGCTTTC GGACACCGAA
GTCGACGAAA ACCGCCTGCT GCAGGAAGTC GCCTACATCG CCGAACGAGC CGACATCAAC
GAGGAGATCG TCCGCCTGAA GAGCCATTTC GATCAACTCC GCGAGCTTCT CTCGGAACAG
GCGCCCTCGG ACGGCAGGAG GCTCGATTTC CTGGCGCAGG AGCTGCACCG GGAAGTCAAT
ACGATCGGGA GCAAGACCGG CGACCTGGAA ACCGTTCAAG CCGTGGTGCG CATGAAAACC
GAAATCGGGA AAGTGAAGGA GCAGGTCCAG AATATCGAAT AG
|
|---|
| Protein sequence | MIASMTAFGR TQKETSGYSI TVEVRTLNGR GLDIVPRLPK NFLEFEDACR KLVSQSLRRG
RVEVFVQIES TSPELKAPRL NLPLARHYWE QLMELHRSLP ASAPPMLDSL LRVPYLFEAR
EDDPDRELIR ELLTGALSEA LEQVRSMRLV EGESLRKDCL ERLEVLARDL ALIESRKDLV
VLEYQQKIRD RIQELLSDTE VDENRLLQEV AYIAERADIN EEIVRLKSHF DQLRELLSEQ
APSDGRRLDF LAQELHREVN TIGSKTGDLE TVQAVVRMKT EIGKVKEQVQ NIE
|
|---|
| |