Gene Sfum_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3609 
Symbol 
ID4458065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4417405 
End bp4418580 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID639704380 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_847714 
Protein GI116751027 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0862663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG AAAAAGCCAA AATCAGCCGC CGGGATTTTT TCAAGGGAGC GGCCATGGGC 
GTTCTGGGAG GCGCTGCTTT GGGGATGGGC CTTTTCTCCT ATTCCCCCTG GCGCAAGGAC
TACTTGCCGA AAGTGGGGCG TAAGCTCACG GACATAGGCA CCTGCAAGTC CGTCAAGGTG
ACGAACATTT CGGAGACCAG CTGGTTCGAA AACTCGGTGC TCATGGGTGA CATCAAAGGC
GCGGGTGGGC TCCTGGTCAA TCAATACAGC TACAACTGGC CGCCCTTCGG TGATGGTACG
GGCCTGGGAA AAGGAACCTA TGAGAGCGGC GTGGGCAGGA TTCGGCGCTT CCTTCCGAAC
AACCTCGAGG AAGCGTGGGC CGTGGCCGAA AAACTGGCCG TTCATCCGGA AAATGCAGGT
GGCTTTGCCT GCCTGATTGA ACTGGAGGAA CTGGACGGCA GGACGCGCAA ATTCCTCCTC
GACAGTGGTT GGTCCTACAA GTGGATGGAC GAGTGTTTCA AACGCGAGGG CATCGACCGG
ATGCTGATGA ATCGGGAAAT CGAGGCTATC ATCATTTCTC ACGAGCACTT TGACCATTTT
TGGGGAATTC CGGTCACCTA CAAGTACGAT CCCGCCATTA CCACGTACAT CCCCGAAGGG
TTCTATCCCG AAGGGCTGCA GTACCTCAAG GATGCCGGTC ACAAGGGAGA GCTGATCAAA
GTCAAACCGG GTCTCAATCC CATCATCTCC GGCCTGGCAA CCTTTGTTTT CGCCGTTCCC
ATTATCTGTC GCGTCTACGG GGAACAGTCG ATCTACGTCA ACGTGAAGGA CCACGGCCTG
GTCAGCATCA CCGGATGCTG CCACCAGGGC ATCATCCAAT TTGCCGAGAC GGCTTTCAAG
GAGGTCAAGT ACGAAAAGGA TCAGCTCTTC GGCATTTACG GCGGTCTGCA CATCTCTCCT
TTCGAGGACT GGGACCCCAA GTATGACGAC CTGGTGCTCT CCCTCGGGAA ATACGGCTTT
CAAAAGATCG GATGCAACCA CTGCACTGGG TTGCTCTGTG CCAAGAAGTT CGTCGAAGGC
GGCTATCCCG TCGTCAAGGG GACGGCGCGT TTCCGGACCA AGGAAACCAA CTACCTTGGC
AACGGCGACA AGATCGGCTT CGGGATCGAA GTGTGA
 
Protein sequence
MSEEKAKISR RDFFKGAAMG VLGGAALGMG LFSYSPWRKD YLPKVGRKLT DIGTCKSVKV 
TNISETSWFE NSVLMGDIKG AGGLLVNQYS YNWPPFGDGT GLGKGTYESG VGRIRRFLPN
NLEEAWAVAE KLAVHPENAG GFACLIELEE LDGRTRKFLL DSGWSYKWMD ECFKREGIDR
MLMNREIEAI IISHEHFDHF WGIPVTYKYD PAITTYIPEG FYPEGLQYLK DAGHKGELIK
VKPGLNPIIS GLATFVFAVP IICRVYGEQS IYVNVKDHGL VSITGCCHQG IIQFAETAFK
EVKYEKDQLF GIYGGLHISP FEDWDPKYDD LVLSLGKYGF QKIGCNHCTG LLCAKKFVEG
GYPVVKGTAR FRTKETNYLG NGDKIGFGIE V