| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3588 |
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| Symbol | |
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| ID | 4458114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4397667 |
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| End bp | 4398677 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704359 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_847693 |
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| Protein GI | 116751006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.565574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.470316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTC ATCACAGGTC CTTTCACGTC GTCTTCGCCC TGATCGTTGT ATTCCTTTTG
GCTTCAACGG TCAGTGTCCA AGCCGCGGAA TACCGGATCC GGGTCGCCAA CCCGGTGGCG
GCGGATCATT CCTGGGGGCG GGGCGCGGAA TTCTTCAAAC AGGAAGTGGA AAAGGCGTCC
GGCGGGAAGA TTTCCGTCGA GGTCCATCAT GCCGGAGCAC TCGGCAAGGT TCGGGAGACC
ATGGAAATGG TCAGGATGGG AACCCTGGAA TCGGCCCTGG GCGGGGTCGC CAACTTCCAG
CGCAATGTGC CCGAGCTGGG CATCACCGTT CTTCCCTACC TCTGGAAGGA CCTGAAAAGG
CAGTTCGAAG TCCTGGAAGG ACCTCCGGGC AAGGAACTCG AAAAGAGAAT GCTTGCCGCC
GGCTTCCACA GCCTGGGTTT CTGGGACAAT GGGTTTCGGC ACGTGTCCAA CAACCGTAAA
CCCATCGAGA CCGTGGACGA TCTGAAAGGG CTCAAGATCC GGACCCTCCC CACCCCGGTT
CACACGGGAT TCTTCAAGGC ATGCGGCGCC GCGCCCACTC CCATGGACTT CACCGAATTG
TTCGAAGCGC TGAGAAGCGG CGTGGTCGAC GCTCAGGAGA ACCCGCCGTC CATGACGTAC
ACGGCCAGGT TCTACGAGGT GCAGAAATAC TATTCGCTCA CCGGCCACGT CAACGAGGTC
GGGTGCTTCA TCATGAACAA GACGTTCTTC GACAAGCTGC CCAAGGATCT TCAGGCCGTC
GTCGATGCGG CCGCCAGGAA GACCAGGGCC TGGCAATGGG CCGAGAACGA CAAGGACAAC
GCAAAGTACC TGAAGGAAAT GGAAAAGGCG GGGATGAAGG TCAATACCCT GAGTGAAGCC
GAACTGGCAA AGTTCCGCAA GATCGCTTTG GAACTCTATC CGGAAGCCAT CAAGGACTTC
GGAAAAGACG GGAAGATGCT GACGGACATG TTCGTCAAGG CCAACCAATA G
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| Protein sequence | MKSHHRSFHV VFALIVVFLL ASTVSVQAAE YRIRVANPVA ADHSWGRGAE FFKQEVEKAS
GGKISVEVHH AGALGKVRET MEMVRMGTLE SALGGVANFQ RNVPELGITV LPYLWKDLKR
QFEVLEGPPG KELEKRMLAA GFHSLGFWDN GFRHVSNNRK PIETVDDLKG LKIRTLPTPV
HTGFFKACGA APTPMDFTEL FEALRSGVVD AQENPPSMTY TARFYEVQKY YSLTGHVNEV
GCFIMNKTFF DKLPKDLQAV VDAAARKTRA WQWAENDKDN AKYLKEMEKA GMKVNTLSEA
ELAKFRKIAL ELYPEAIKDF GKDGKMLTDM FVKANQ
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