Gene Sfum_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3572 
Symbol 
ID4458133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4378163 
End bp4380268 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content62% 
IMG OID639704343 
Producthypothetical protein 
Protein accessionYP_847677 
Protein GI116750990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.433976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.472948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAACG TCTCTTCGTT GTTTGCGATA TTCTTCCTTT GGGCATTGCC GTGCTCCGCT 
CAGATGGCTC CCGTGCCGTC CGAGCCGCTG CCCGTGCGGA AGGTTGTTTT TTACAAGCAT
GGCATGGGCT ATGTCGAGAG GGAAGGGAAG ATCAAGGGTA ACGCCACCCT CTCGCTGGCG
TTTCGGTCCG ACCAGATGAA AGATCTTTTG ACCAGCTTCT TTGCGGTGGA TCTGGGGGGC
GGCAAGATTT CATCGGTCCG GTACGAAACC CGGGACCCGC TTTCCAGGCA GCTCAAGGAT
ATTCTCATCA CGGTGCCCGA GCAGACGGCG CTCAGCCAGT TCCTGGCCCA GCTCAAGGGT
GCCCGTCTGA CGGCCAAGGC GGCCGGAGAG GTAGTCGAGG GCCGCATTCT GGGCATCGAG
CCGGTCTCGG AGGTGGTCGG CGGCCAGGAG GTCCGGAAAG GCTACCGGCT GGTGCTCCTG
ACCGATGCCG GTCCCATCCG GTCGCTTGAT CTGTTCGGCA TTTCCGAGTT CATGCTGGCC
GATGACGCGC TTCAGCGGGA TCTGCGCAGG CTGCTCGATC TTTCCCTCGA CAGCAAGTAC
ACCAACCGCA AGAAGCTGAC GTTGAGTGCC GCGGGGCAGG GGGAGCGACT GCTGCGCATC
GGCTATCTCA TCGAGATGCC CATCTGGAAA TGTTCCTACC GCGTCATATT CGACGAGAAG
AAGAAGGATG CCGCTCCGCT CCTCCAGGGC TGGGCACTGG CCGAAAACAC CACCGAAGAC
GACTGGCAGG ATGTGACGAT TTCCTTTGTC GCCGGGAATC CGCTCTCCTA CGTGATGGAT
TTGTATTCGC CCTACTACGT GCGACGCCCC CAGGTGCAAA TCCCGGGCTT TCAGGACCTG
GCGGTGGACT GGGGTGCGTC TTCGTCGCCC GATCTGATCG AGGAAGATGA GGCGCCGATG
GTGAGGGAGG AGCGGCCAGG CCCGGCACGG AAGGCAAAAC GGTCCGCGCC CGCGGGGGCG
GCCCAGAGCA TGGATCGGGC CGGAGCTCTC CCGGCCCCGG CCCCGGGCGC CGCTCCTGCC
AGGCCGATGG GAGAGCTTCT GGCTTCGAGC ACCGGCGACG AGGCCCAGGG AACGCAAGTC
GGAGAGCTCT TCAGTTTCGA AGCCAGGGAA AAGGTCTCCA TTCCCCGCGG TCAGGCCGCC
ATGGTTCCGA TCCTCTCAAA GCAGATCAAC GGCCGCCGTC TCGCCTATTA CAAGAGGGCT
TTCTCGTCCA GGGTCACCAA CGCGTTCGTG ATGCGCAACG ACACCGACGT GACGCTGGAA
GCCGGGGCGG TCACATTCTT CGAGGGCAGC ACCTCTCTTG GGGAGGGCAT ACTCAACCAC
ACGCTCCCCC CGGGGAGCCA GGAGGTCGTC CCATACGCCC TGGACCCCTC GGTGGACGTC
GTGCCGCAGC ATAAGACCCT GCGTGAACCG CACTTCAAAG GCCGCCTCGT GGACGGCATC
CTCACGCTCA CCTGTGTCGA GACCCTCACC AGCACCTGGA AAATCGTCAA CCGCGGCAAG
GAACCGGTCA CGCTGTGGCT GAACCAGCCC AAGAACGCCG GTTTCCGACT GGGCAAGCCC
GAAAAGCCGC TCAAGGAGGT GGACAACCAC TACCGCTTCG AGGTGCCGCT CAAGGCCGGA
GAAACGACGG ATTTCGTGGT CGAGGAGAAA CGCGACGTTC GGGAAACGGT GCAACTGGCA
AAGAGCAGTG AAGATCAGAT CCGTTTCTAC GCGTCGCAGC GGTATCTGTC GGGGGGTGCC
AGGGCGTTCA TGAAGGATCT CGGTGACCTG ATGGCTCAGA GAGCCGCCCT TCAACGGCAG
ATCGACGACT GGAATCAGCA GGTTCAGCGC CTGAGCGACG AACAGTCACG CGTGCGGTCC
AACCTCGGCT CGCTGCGTTC GGACCAGCCC AAGGAGCAGG AATTGCGGGC CAAATGGGTT
GCTGCCCTCG CCTCCAACGA GGAGCACCTC ACGGACCGGC GGGGAAAACT CGACGAGGCC
GGCGTCAAGA TCCGCCGGTT GGAAGACGAA GTGGCCAGGA AAATCCGCGA GTACAAGGAC
GAGTAG
 
Protein sequence
MRNVSSLFAI FFLWALPCSA QMAPVPSEPL PVRKVVFYKH GMGYVEREGK IKGNATLSLA 
FRSDQMKDLL TSFFAVDLGG GKISSVRYET RDPLSRQLKD ILITVPEQTA LSQFLAQLKG
ARLTAKAAGE VVEGRILGIE PVSEVVGGQE VRKGYRLVLL TDAGPIRSLD LFGISEFMLA
DDALQRDLRR LLDLSLDSKY TNRKKLTLSA AGQGERLLRI GYLIEMPIWK CSYRVIFDEK
KKDAAPLLQG WALAENTTED DWQDVTISFV AGNPLSYVMD LYSPYYVRRP QVQIPGFQDL
AVDWGASSSP DLIEEDEAPM VREERPGPAR KAKRSAPAGA AQSMDRAGAL PAPAPGAAPA
RPMGELLASS TGDEAQGTQV GELFSFEARE KVSIPRGQAA MVPILSKQIN GRRLAYYKRA
FSSRVTNAFV MRNDTDVTLE AGAVTFFEGS TSLGEGILNH TLPPGSQEVV PYALDPSVDV
VPQHKTLREP HFKGRLVDGI LTLTCVETLT STWKIVNRGK EPVTLWLNQP KNAGFRLGKP
EKPLKEVDNH YRFEVPLKAG ETTDFVVEEK RDVRETVQLA KSSEDQIRFY ASQRYLSGGA
RAFMKDLGDL MAQRAALQRQ IDDWNQQVQR LSDEQSRVRS NLGSLRSDQP KEQELRAKWV
AALASNEEHL TDRRGKLDEA GVKIRRLEDE VARKIREYKD E