Gene Sfum_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3560 
Symbol 
ID4458121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4362949 
End bp4363359 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content63% 
IMG OID639704331 
Producthypothetical protein 
Protein accessionYP_847665 
Protein GI116750978 
COG category[R] General function prediction only 
COG ID[COG5496] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.492346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GGAACAAGCT GCAGCCCGGA ATCAAGGGAA CCTCCCGGAC CTCGGTCGAT 
GCCGGGATTA CCGCCCTTTC CATGGGCAGC GGCGAAATCG AGGTGCTTGC CACTCCGGCC
ATGGCCGCGC TTATGGAAGC CGCGGCCGTC AACTGCGTGA AGCCTTATCT GCCCTCAAAC
GAGACGTCGG TCGGAGTCCA TATTGAAACC TCCCACATCG CGGCCACCCC GCCCGGGATG
GGCGTCAGGG CCGAAGCGAC CCTGGAAGGC GTCGAAGGCC GCAGGCTTTT CTTTCGCGTG
GAAGCCTACG ACGACCGGGA GAAGATCGGC GAGGGCCGCC ACGAAAGAGT GATCGTGGAC
CGGGAGAAGT TTCTCGGCAA GGTGAACAAG AAATGCGCCG GGCCTTCCTG A
 
Protein sequence
MNDRNKLQPG IKGTSRTSVD AGITALSMGS GEIEVLATPA MAALMEAAAV NCVKPYLPSN 
ETSVGVHIET SHIAATPPGM GVRAEATLEG VEGRRLFFRV EAYDDREKIG EGRHERVIVD
REKFLGKVNK KCAGPS