Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3557 |
Symbol | |
ID | 4458118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4359988 |
End bp | 4360722 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704328 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_847662 |
Protein GI | 116750975 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.252048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGATC GATCCATCGA GAACAAGGTC CTCGCCCTGA AAGAGAAGCT GAGCGGTGCC GAGAACGTCG TGGTGTTGAC CGGGGCCGGC ATTTCCGCGG AGTCGGGCGT TCCCACGTTT CGCGGGGAGG GCGGACTCTG GCGCACGTAC CGGGCCACCG ACCTTGCGAC TCCCGAGGCA TTCGAGAACG ATCCCAAGCT TGTGTGGGAG TTCTACGGGT GGCGCAGACA GCTTCTGGCG CCGCTCGATC CCAATCCCGG TCACTATGCC CTTGCGGAAC TGGAACGCAG GATACCGCGC TTCACGCTGA TCACCCAGAA TATCGACGGC CTTCACCAGA AGGCCGGAAG CGCAAACATC CTAGAGTTGC ACGGCAACCT GTGGTGGGTT CGCTGCACCC GGTGCGGCAG CCTGACCGAA GACCGCACCG TTCCGCTGCC CGAGTTGCCC CGCTGCGGTT CGTGCCGGGG ACTGCTCAGG CCTCACGTGG TGTGGTTCGG AGAAATGCTC GAGCCCAAAA TACTCGATCA GGCCTACGAG GCGATCCGGG ACTGCGGCGT GATGCTGGTC GTCGGCACGT CGGGAACCGT TCAGCCGGCG GCGTCCATGG GGGTGATCGC CAGAAAGCAG GGGGCGACGG TGGCCGAAGT CAATCTCGAT CCGACCCCGT ACAGCGGCGC CTACGATATC AGTATTTCCG GGAAAGCCGG GGAAATCCTG CCGCGGCTGC TGTGA
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Protein sequence | MGDRSIENKV LALKEKLSGA ENVVVLTGAG ISAESGVPTF RGEGGLWRTY RATDLATPEA FENDPKLVWE FYGWRRQLLA PLDPNPGHYA LAELERRIPR FTLITQNIDG LHQKAGSANI LELHGNLWWV RCTRCGSLTE DRTVPLPELP RCGSCRGLLR PHVVWFGEML EPKILDQAYE AIRDCGVMLV VGTSGTVQPA ASMGVIARKQ GATVAEVNLD PTPYSGAYDI SISGKAGEIL PRLL
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