Gene Sfum_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3557 
Symbol 
ID4458118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4359988 
End bp4360722 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID639704328 
Productsilent information regulator protein Sir2 
Protein accessionYP_847662 
Protein GI116750975 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGATC GATCCATCGA GAACAAGGTC CTCGCCCTGA AAGAGAAGCT GAGCGGTGCC 
GAGAACGTCG TGGTGTTGAC CGGGGCCGGC ATTTCCGCGG AGTCGGGCGT TCCCACGTTT
CGCGGGGAGG GCGGACTCTG GCGCACGTAC CGGGCCACCG ACCTTGCGAC TCCCGAGGCA
TTCGAGAACG ATCCCAAGCT TGTGTGGGAG TTCTACGGGT GGCGCAGACA GCTTCTGGCG
CCGCTCGATC CCAATCCCGG TCACTATGCC CTTGCGGAAC TGGAACGCAG GATACCGCGC
TTCACGCTGA TCACCCAGAA TATCGACGGC CTTCACCAGA AGGCCGGAAG CGCAAACATC
CTAGAGTTGC ACGGCAACCT GTGGTGGGTT CGCTGCACCC GGTGCGGCAG CCTGACCGAA
GACCGCACCG TTCCGCTGCC CGAGTTGCCC CGCTGCGGTT CGTGCCGGGG ACTGCTCAGG
CCTCACGTGG TGTGGTTCGG AGAAATGCTC GAGCCCAAAA TACTCGATCA GGCCTACGAG
GCGATCCGGG ACTGCGGCGT GATGCTGGTC GTCGGCACGT CGGGAACCGT TCAGCCGGCG
GCGTCCATGG GGGTGATCGC CAGAAAGCAG GGGGCGACGG TGGCCGAAGT CAATCTCGAT
CCGACCCCGT ACAGCGGCGC CTACGATATC AGTATTTCCG GGAAAGCCGG GGAAATCCTG
CCGCGGCTGC TGTGA
 
Protein sequence
MGDRSIENKV LALKEKLSGA ENVVVLTGAG ISAESGVPTF RGEGGLWRTY RATDLATPEA 
FENDPKLVWE FYGWRRQLLA PLDPNPGHYA LAELERRIPR FTLITQNIDG LHQKAGSANI
LELHGNLWWV RCTRCGSLTE DRTVPLPELP RCGSCRGLLR PHVVWFGEML EPKILDQAYE
AIRDCGVMLV VGTSGTVQPA ASMGVIARKQ GATVAEVNLD PTPYSGAYDI SISGKAGEIL
PRLL