Gene Sfum_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3528 
Symbol 
ID4458159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4318322 
End bp4319533 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content62% 
IMG OID639704299 
Producthypothetical protein 
Protein accessionYP_847633 
Protein GI116750946 
COG category[S] Function unknown 
COG ID[COG5441] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.91982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG CGGTAGTGAT CGTCGGTTCG CTGGATACCA AAGGGGAGGA GGTCGCTTTC 
ATCAGGGACC TGGTGGAAAT GGAAGGTCTG AAAACCCTCG TGGTTGATTG CGGCATGACG
GGTGAGCCGG CGTTCAAGCC GAACGTCACG CGCGGCGAGG TGGCGGCGGC GGCGGGAGGG
GAGCCGGCCG GGCTCGCATC CGGGGAGCAC GGGGATGAGG CCGTGAATAC CATGGCTGCG
GGGCTGGCGG TCGTCGTGCG CGGACTGTAC GAAAAAGGCA GGCTGCACGG GATCATCGGG
ATGGGGGGCG CCGTGGGGAC ATCCGTGGCC ACAACCGCCA TGCGCACCCT TCCGGTCGGT
CTCCCCAAGG TGATGGTGTC CACGGTGGGC GGCGGAGACG TGAGCACCTA CGCGGGCACC
AAGGACATCA CCTTCATCCC GTCGATCGTG GATATTGCCG GGATCAACCG AATCAGCCGC
AGAATTTTCG CCAATGCCGC CGGGGCGATT GCCGGAATGG TGAAAATGGA GATTCCGCGG
GCGTTCGATG AGAAGCCTCT CGTTGCGGCA TCGATGTCCG GGAACACGAC GGCCTGTGTT
GACCGCGCGC GCAGCGTTAT GGAGAAAATG GGGTACGAAG TGCTGGTGTT CGATACCACC
GGGGCCGGCG GCAGGACCAT GGAAAGCCTC GTTGATGACG GTTTTGTGGT CGGTTCGATG
GACATCACCA CCACGGAGCT TGCGGATTTC GTGTGCGGAG GCGTGTTCAA CGCCGGATCG
GACCGGTGCA TGGCGGCTTC CCGAGCAGGT ATCCCCACCG TTCTGGTCCC GGGATGCGTG
GACACGGCCA ACTTCCCGGG AATGGAAACG GTGCCGGAGA AATACAAGAG GCGCAACCTC
TACCGGCTGA ACCCCAACGT CACCCTGCTG CGCACGAACG TCGAAGAAAA CGCCCGCATA
GGCGAAATCA TCGCCGCCGC GGCAAACGCC GCCACGGCTC CGGTCGCTGT TTTGCTGCCC
TTGAAGGGGG TATCCGCGCT GGGCGGCGAA GGCGGCTGTT TCCGGGATCC GAAGGCAGAT
CGCGCCTGCT TCGAGAGCAT CAAGAAGAAT CTGAAGCCAT CCATCCCGGT GATCGAAATG
GACAACAATA TCAACGATCC GGAATTTGCG GAAAAGGTGG CGTTGACCCT TCTGAACATG
CTTGACCTGT AA
 
Protein sequence
MEKAVVIVGS LDTKGEEVAF IRDLVEMEGL KTLVVDCGMT GEPAFKPNVT RGEVAAAAGG 
EPAGLASGEH GDEAVNTMAA GLAVVVRGLY EKGRLHGIIG MGGAVGTSVA TTAMRTLPVG
LPKVMVSTVG GGDVSTYAGT KDITFIPSIV DIAGINRISR RIFANAAGAI AGMVKMEIPR
AFDEKPLVAA SMSGNTTACV DRARSVMEKM GYEVLVFDTT GAGGRTMESL VDDGFVVGSM
DITTTELADF VCGGVFNAGS DRCMAASRAG IPTVLVPGCV DTANFPGMET VPEKYKRRNL
YRLNPNVTLL RTNVEENARI GEIIAAAANA ATAPVAVLLP LKGVSALGGE GGCFRDPKAD
RACFESIKKN LKPSIPVIEM DNNINDPEFA EKVALTLLNM LDL