| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3525 |
|---|
| Symbol | |
|---|
| ID | 4458156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4313468 |
|---|
| End bp | 4314925 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704296 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847630 |
|---|
| Protein GI | 116750943 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCACCCG TGAAACGGGA TGTCGGGGAT GTCGGGGATG TCGGGGGTGC GGGTTCCGAC
TTCACATTCG AAGGGGAGAA AGTGGCCGGA AACACCAATG AATCCGGAAT ATTGTCCGGC
ACGACGACCG GTTCCGGCGG CGGAGAACCC GCACGGGGCG ACGTGCGCGG GGAGCGCGGC
AGTCGCGCGG TGAGCATCGG GAAGACGGTC CGGGAGGCGA CCGCTTTCCC GAAACGGCAC
CCGCTGCTGA GCGCCGTGAA TTCGCTCGCA CGGATGTTTC CCTGCAACGG TCTGATGCGA
CTGGATGAAG ACCGCCTGCT CGCGCGCGCC CGCCGAACGA CCGGCCTGGT CGACTTTGGA
GGGGATTCCT TCCGTGAGCC CTTCAGAATT CTGCTCGGGT CGCTGGAGGC GGACGCGCAA
CTGAACTTCA TCGGACGGGT CTGCGTGCGC AACGACATTG TCCGCACCCT GCGGAACCGG
CTGCGCCTGG TGGAAGACGT GAAGCGTCAT CCGGAGATAT CCGGTGAGGT CATTCGACGC
CCGCTGTTCA TCACGGGGCT GCCGAGAACC GGTTCGACCT TTCTCCATGC GCTGCTGGCC
CAGGACCCGG CCGCCCGGTC GCCGCAGGTA TGGGAAGTGA TGCACCCTTC TCCTCCGCCG
GAGAAAGCCG CTTATGGCAC CGACCCGCGA ATCGCCAGGA CTGAAAAGGA ACTGCGGTGG
ATCGACGTTC TGATGCCTGA TTTCAACACC GTCCACCTGA TCGAGGCGAC GCTTCCCCAG
GAGTGCATCG CCATCACCGG ACTGTCTTTC ATCAGTTACG TGTTCGATTC GATGTATTAC
GTGTATTCGT ATCGGAACTG GCTCGACAGG GCGGATAAAC GCCCGGCCTA CGAATGGCAC
CGGAAATTCC TCCAGCACCT GCAATGGCGC TGCCCCGGAA CGCACTGGGT GCTCAAGGCG
CCCAGTCACC TGGTCTCGCT CGATGCGCTC CTGCAGGTCT ATCCCGATGC GGGCATCATC
ATGACCCACA GGGACCCGCT CAAGGTGATG CCTTCCTGCA CCAGCTTCAC CGCCGTGTTG
CGCGGGGCGT TCACCGATCG CCTGGACAAG GCTCAACTCG GCGAGGAAGT GAAGTGGCGC
TGGGAGGGGT CCGCGGCATC GGCCATCCGG TTTCGTGAAG AACACCCGGC CCTGCGGAAC
CGGTTTTTCG ATGTCGGGTA TGTCGACCTC GTGCGGGATT CCGTGGCGAT GGTCCGCCGC
ATCTACGACC ATTTCGGGAT GCAGCTTACG CCCGAGGCCG AGGAGGCGAT GAGGGCCTTT
GCCGGAAGAC ACCGCATGAA CAAGCACGGT GTGCACCATT ACACGCTCGA GGAATTCGGT
TTCGATCCCG ATGCCCTGGC ACGATGCTTT CGGTTCTACA CCGACTATTT TGATGTCATG
CCCGAAACGC ATCGATGA
|
|---|
| Protein sequence | MSPVKRDVGD VGDVGGAGSD FTFEGEKVAG NTNESGILSG TTTGSGGGEP ARGDVRGERG
SRAVSIGKTV REATAFPKRH PLLSAVNSLA RMFPCNGLMR LDEDRLLARA RRTTGLVDFG
GDSFREPFRI LLGSLEADAQ LNFIGRVCVR NDIVRTLRNR LRLVEDVKRH PEISGEVIRR
PLFITGLPRT GSTFLHALLA QDPAARSPQV WEVMHPSPPP EKAAYGTDPR IARTEKELRW
IDVLMPDFNT VHLIEATLPQ ECIAITGLSF ISYVFDSMYY VYSYRNWLDR ADKRPAYEWH
RKFLQHLQWR CPGTHWVLKA PSHLVSLDAL LQVYPDAGII MTHRDPLKVM PSCTSFTAVL
RGAFTDRLDK AQLGEEVKWR WEGSAASAIR FREEHPALRN RFFDVGYVDL VRDSVAMVRR
IYDHFGMQLT PEAEEAMRAF AGRHRMNKHG VHHYTLEEFG FDPDALARCF RFYTDYFDVM
PETHR
|
|---|
| |