| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3517 |
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| Symbol | |
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| ID | 4458184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4302730 |
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| End bp | 4304121 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704289 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_847623 |
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| Protein GI | 116750936 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA CAGATAAGAC CAAAGAGCAA CTCATCAACG AACTGGAGGA GTTGCGTCGA
AGGATCGCCG AACTGGAAGG GCACGGGAGT TTCAGAACCC CAGCCGGACA GAGTCCGGGA
TCAGCGGAGC GGAGCGGCCC GATCCCGGAG AGGCGGCAGC CCGACCGTTC ATGCGGCGAT
TCCGCGCCGA GGAAGCAGCC CCGAATTCCG CCCGTTCCAT TCCCTCCCCC GGGAAGCCTC
CTTGGAAAAA CAATTGCCAG GCGCGGCCAG ACCGAGGAGG CACTTCAAGT CGTCTGTCAG
CAGCTCCTCG GGATCATTGA TTTTCTTCCT GATGCCACCT TCGTGATCGA TGAAGACGGG
AAGGTCATCG CCTGGAATCA CGCCATTGAG GAAATGACGG GCGTGAAGAA GGAAGATATC
ATCGGTCAGG GCGACTACGC CTACGCCGTC CCGTTCTATG GGGAGCGACG GCCCATACTG
GTGGACCGGG TGTTCGACAA GGCGCTTCAG TTCAGGCATC ATTATGATTT TGTGGTCGAG
AAGGGGAACA CGATTTATGC GGAGGCATAT GTTCCCATGA CTTTTCGGGG CAAGGGCGCG
TATCTCTGGA TCAAGGCATC TCCCCTCTGC GACGATACAG GCCGGATGAT CGGGGCCATC
GAATCCATTC GCGACGTCAC CGAACGCAAG AAACTGGAGG AAGCCCACCG CATCAACGCG
GAGAAGATCA AGCTTTTCGC CTATTCGGTG TCCCACGATC TGAAGAGTCC CATCGTCGGC
ATACACGGCC TGACCCGTCT TCTCTTCCGA CGTTACCGGG ACTACCTGGA CGAGAAGGGA
AAGCTTTACT GCGAGCAGAT TTTGAAAGCC ACCGAGCAGG CCGTGGCGCT GGTCGATGAA
ATCAACGTCT ATATCAGGAC GAAGGAAATA CCCCTGCACT TCGAGGTGTT CAAGCCCTCC
GAGACCATCA AGATGGTTCG AGACGAGTTC GGCGCCCTGC TCAGCATCCG GCGCATCGCA
TGGGTTGAAC CGGACCCCGT TCCGGAGATC AAGGCCGACC GTCTTTCGCT TTTGAGGGTA
CTCAGGAACC TGGTGGACAA TGCTCTCAAG TACGGCGGCA ACCGGCTCAC CGCCATCCGG
ATCGAATACG CCCAGACCGA GGACTTCCAC GTCTTCTCCG TCTGCGACGA TGGGGTGGGA
ATGAAGATCG AAGGAAGCGA GGAGATGTTC AACGCCTTCC AGCGCGACAA GACAGCGCGG
GACGTGGAAG GAACCGGGCT GGGCCTTGCC ATTGTCAAGG AGATCGCGGA GAAGCATCGC
GGCAAGGTCC GGGTGGAGCG CGGCCCGGTC TGCGGCACGA TCTTCCGCGT GTACCTCTCA
AAGCACCTGT GA
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| Protein sequence | MNDTDKTKEQ LINELEELRR RIAELEGHGS FRTPAGQSPG SAERSGPIPE RRQPDRSCGD
SAPRKQPRIP PVPFPPPGSL LGKTIARRGQ TEEALQVVCQ QLLGIIDFLP DATFVIDEDG
KVIAWNHAIE EMTGVKKEDI IGQGDYAYAV PFYGERRPIL VDRVFDKALQ FRHHYDFVVE
KGNTIYAEAY VPMTFRGKGA YLWIKASPLC DDTGRMIGAI ESIRDVTERK KLEEAHRINA
EKIKLFAYSV SHDLKSPIVG IHGLTRLLFR RYRDYLDEKG KLYCEQILKA TEQAVALVDE
INVYIRTKEI PLHFEVFKPS ETIKMVRDEF GALLSIRRIA WVEPDPVPEI KADRLSLLRV
LRNLVDNALK YGGNRLTAIR IEYAQTEDFH VFSVCDDGVG MKIEGSEEMF NAFQRDKTAR
DVEGTGLGLA IVKEIAEKHR GKVRVERGPV CGTIFRVYLS KHL
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