| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3509 |
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| Symbol | |
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| ID | 4458176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4289211 |
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| End bp | 4291928 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704281 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_847615 |
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| Protein GI | 116750928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.434543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.526227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAAG ATATCATCAA CCTGACGGTA AACGGGAAGA ATTTTCAAGG AAGGAACATC
CGGGGAAAGC GGGGGCAGAC CGTACTTGAA GTCTTGAAGG ACAACGGCAT CCATGTTCCC
ACCCTGTGCT ACCATCCCCG GATGCCGCCT TACGGGGGAT GCAGATTGTG CATCGTCGAA
ATCGAGAACA TGCGCGGTCT CCCGCCTTCC TGTACCACCC CGGCAACCGA CGGAATGGTT
GTGAACACGC ACTCACCCAA GGTGGTCGGG GTGCGTAAAA CGGTGCTGGA ACTGCTCCTC
GCCTACGGGG ACCATAATTG TCTGCTGTGC GAGCAGACGG GCAGCTGCGA GCTGCAAAAC
CTGGTTTACG AGCACGGCAT CGACCATGTT CGCATCAAGT CGGAATTCGT TCCCAAAATA
AAGGACGATT CACATCCGAT GATCGTCCGT GACCACAACA AGTGCGTGCT GTGCGGCCGC
TGCGTCAGGG CCTGCCTGCA AGTACAGGTG AACGGGGCCA TCGATATCGC GGCTCGCGGT
TCGGATTCCT ACATCACGAC GTTCAACAAC ACCAGCCTGG CGGAATCGAG CTGCGTTTCC
TGCGGTCAAT GCGTTCAGGC ATGCCCGGTG GGCGCCCTGA CCGAGAAAAA ATCGAGGTTT
AAGGGCCGTG CGTGGGAAAT GAAGAAAGTG CGCACCACCT GCCCCTACTG CGGTGTGGGT
TGCCAGATGT GGCTGCACGT CAAGGGCGGC AGGATCGTCA AAGTGACCGG GGTCGAGGAA
GGCGCCCCCA ACCATGGGCG ATTATGTGTC AAGGGAAGGT TCGGCTACGA CTTCATCTAT
TCGGAGGACA GGCTCAAGAC GCCTCTCATC AAGAGCAACG ACGGTTTTCG CGAGGCCTCC
TGGGATGAAG CCCTCGATCT CGTCGCCTCG AGGCTCAAAA AAATCATTGC AAAGCATGGT
CCGGACTCCG TTGCCGGAGT GAGCTCGGCT CGAAGCATCA ACGAAGATTC CTACCAGATG
CAGAAGCTCT TCAGGACGGC CATCGGCACC AACAACATAG ACAACTGCGC GCGTGTCTGC
CACGCTCCAA CCGTGGCGGG CCTGGCGAAA TCTTTCGGTT CCGGGGCCAT GACGAATTCG
TTTGACGACT TCGCCAACGC GAAAATGATC CTGGCCATAG GCACGAACGC GACCGAGGCA
CATCCGGTGG CGGGCACGTA TTTGAAGAAC GCGGTGGCCA AGGGCGCCGA GTTGATCGTT
GTCGATCCGC GACGCATAGA GCTTGCCGAC CATGCCGTGC TGCACGCTCA GATAAAAGTG
GGAAGCGATA TAGCCTTTCT CAATGGAGTC ATGAACGTTC TCATAAACGA GAATCTCCAC
GACAAACAGT ACGTGGCCTC GTACACCGAC GGTTTTGAAT CGCTCAAGGC CAAGGTGATG
GAATATCCGC CGGAGAAGGC CGCGGGCATC TGCGGCGTAA GCGCGGAGAT GATTCGGGAT
GTGGCGCGCC GCCTGGCTTC AGTAAAGCCG GCGCTCCTGG TCTATACCCT GGGCATCACC
GAGCACACCT GCGGTATGAA CAACGTGCTT TCCTGCGCCA ACCTGCAGAT GCTCCTCGGC
AATGTGGGGT TTGCGTGCGG CGGCGTGAAC CCGATAAGAG GGCAAAACAA CGTCCAGGGT
GCCTGCGACA TGGGGGCTTT GCCGAATCTT TTCCCCGGCT ACCAGAGAGT TGATGATCCC
AAGGCCCAGG AGAAGTTCAA GGCCGCATGG AATGTTGCAA GCCTGCCCGA CAGGCCCGGG
ATCATGCTGC CCCAAATGCT CGATGGGCTT GCGGATGGAA AGATCAAGGC ATTTTACATT
TTTGGCGAGA ACCTGGCCAA CAGCGAACCG GATATCAAGC ACGTCGAACA CTGCCTGAGC
TCTGCCGAGT TTCTGATCTG CCAGGACAAC TTCCCGAACG AAACCACGCG ATTTGCGGAT
GTGATCCTGC CGGCCGCCGC GTGGAGCGAA AACGACGGGA CGTTCGCCAG CAGCGAAAGA
CGCATCAGCA GAGTTCGCAC CGCGAGCGAG GCGCCGGGGA TATCCAGGCC GAACTGGTGG
ATCTTCAAGG AGATAGCGCG ACGAATGGGC CAGGATTGGA AGTCCGAGAG TGGCCAAGAG
CTGTGGGACG ACGAGATATC GGTACTGTCG CCGCCGTTTG CCGGCATCAA GTACTCGCGC
ATCGAGGGCG ACGGGCTGCA GTGGCCGGTT CCCACGGAAA CCCACCCGGG AACGCCCGTC
ATGCACAAGG ACGGCAAATT CACCGGCGGT CGCGGTCAGT TCGTGGCCGT CGACTGGACG
CCTCCGAAGG AAGTCCCGGA CGCGGAATAC CCGTTCACAT TCTGCACGGG CCGGAGACTG
TATCACTATC ATACCCGGAC CCAGACCGGC CGTTGTCAGG GGTTGAACGA GCTCCTGGGC
GAGGAGACGG CGGACATCTC GCGTTTGGAC GCCGCAGAGC TGGGCATCGA GGATGGCGAG
TACATTCGCG TGCGCTCGCG TCGAGGAGAG GTGAAAGTCA AGGCGAGGGT CACGGATCGG
ATGCAAAAGG GCAATGTCTG GATGGCCTTC CATTTCCGGG AGGCCTGCGC CAACTGGCTG
ACAAATCCGG TGTTCGATCC GGTGACGCAG ACGGCGGAAT ATAAAGCGTG TGCGGTGAAG
GTCGAGAAGA TTGTGTAG
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| Protein sequence | MGEDIINLTV NGKNFQGRNI RGKRGQTVLE VLKDNGIHVP TLCYHPRMPP YGGCRLCIVE
IENMRGLPPS CTTPATDGMV VNTHSPKVVG VRKTVLELLL AYGDHNCLLC EQTGSCELQN
LVYEHGIDHV RIKSEFVPKI KDDSHPMIVR DHNKCVLCGR CVRACLQVQV NGAIDIAARG
SDSYITTFNN TSLAESSCVS CGQCVQACPV GALTEKKSRF KGRAWEMKKV RTTCPYCGVG
CQMWLHVKGG RIVKVTGVEE GAPNHGRLCV KGRFGYDFIY SEDRLKTPLI KSNDGFREAS
WDEALDLVAS RLKKIIAKHG PDSVAGVSSA RSINEDSYQM QKLFRTAIGT NNIDNCARVC
HAPTVAGLAK SFGSGAMTNS FDDFANAKMI LAIGTNATEA HPVAGTYLKN AVAKGAELIV
VDPRRIELAD HAVLHAQIKV GSDIAFLNGV MNVLINENLH DKQYVASYTD GFESLKAKVM
EYPPEKAAGI CGVSAEMIRD VARRLASVKP ALLVYTLGIT EHTCGMNNVL SCANLQMLLG
NVGFACGGVN PIRGQNNVQG ACDMGALPNL FPGYQRVDDP KAQEKFKAAW NVASLPDRPG
IMLPQMLDGL ADGKIKAFYI FGENLANSEP DIKHVEHCLS SAEFLICQDN FPNETTRFAD
VILPAAAWSE NDGTFASSER RISRVRTASE APGISRPNWW IFKEIARRMG QDWKSESGQE
LWDDEISVLS PPFAGIKYSR IEGDGLQWPV PTETHPGTPV MHKDGKFTGG RGQFVAVDWT
PPKEVPDAEY PFTFCTGRRL YHYHTRTQTG RCQGLNELLG EETADISRLD AAELGIEDGE
YIRVRSRRGE VKVKARVTDR MQKGNVWMAF HFREACANWL TNPVFDPVTQ TAEYKACAVK
VEKIV
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