| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3508 |
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| Symbol | thiE |
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| ID | 4458175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4287390 |
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| End bp | 4288061 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639704280 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_847614 |
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| Protein GI | 116750927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0511603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.415354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAACAG TGAGCCCGCC CGTGGATTAT ACCCTGTACC TGGTCACCGA CCGGGGACTT
GCCGCGGGTC GTTCCTTCGA AGACATTGTC AGGGAAGGCG TCGAGGGCGG GGTAACCCTG
GTGCAGCTCC GTGAGAAGGA CCTTGCCGTC AGGGATTTCG TCGCGTGCGC CGTCGCTCTC
CGGAATCTGC TCGGGGAGTA CCGGGTTCCC CTGATCGTTA ACGACCGAGT GGACGTCGCC
CTGGCCTGTG GAGCCGCCGG GGTGCACCTC GGGCAGGACG ACATGGACTG TGCGAGCGCC
CGCCGTATCG TCGGGCGGGG CCGGATCGTC GGTGTCTCGG TGAGTTGCGT GGAGGAGGCG
GTGAAGGCCG AAGCGCAAGG GGCCGATTAC CTGGGAGTGA GCCCGGTGTT CAGCACGCCC
ACGAAGACGG ATACTCCTCC CGCGGTCGGG CTCGAGGGGC TGCGGGCCAT CCGGATGGCG
GTTCGCCTGC CGCTGGTTGC AATCGGAGGG ATCAAGGCGG AGAATGCGGC GGACGTGATA
CGGGCGGGGG CGGACGGCCT GGCGGTGGTG TCGGCGATCA TGGCCTGCCC CGAGCCTCGG
GTTGCGGCCC GGACGCTGAA AGCGGCCATT GCCGAGGCAC GGGCCCGGGT CCGTACCGCG
CGGATCGGCT GA
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| Protein sequence | MGTVSPPVDY TLYLVTDRGL AAGRSFEDIV REGVEGGVTL VQLREKDLAV RDFVACAVAL
RNLLGEYRVP LIVNDRVDVA LACGAAGVHL GQDDMDCASA RRIVGRGRIV GVSVSCVEEA
VKAEAQGADY LGVSPVFSTP TKTDTPPAVG LEGLRAIRMA VRLPLVAIGG IKAENAADVI
RAGADGLAVV SAIMACPEPR VAARTLKAAI AEARARVRTA RIG
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