Gene Sfum_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3507 
Symbol 
ID4458174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4286596 
End bp4287402 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID639704279 
Producthydroxyethylthiazole kinase 
Protein accessionYP_847613 
Protein GI116750926 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2145] Hydroxyethylthiazole kinase, sugar kinase family 
TIGRFAM ID[TIGR00694] hydroxyethylthiazole kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.405546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAG AAACAGCTCG GTGCCTCGAG AAGATAAGGG CGCAGCGCCC CCTGGTGCAC 
AATATTACCA ACTACGTCGT GATGAACTAT ACCGCCAATG CGTTGCTGTG CCTCGGAGCA
TCCCCAGTGA TGGCTCACGC GGTCGAGGAA GTCGAGGCCA TGGTCGAGCT TGCCGATGCC
CTGGTGATCA ACATCGGGAC CCTTTCCGCC CCCTGGGTGG ACGCAATGTT CCTGGCCTCG
CGCGCGGCCA TAGAAAGGTC GATTCCCGTC GTTCTGGACC CGGTGGGAGC CGGCGCCACC
GCCTTCCGGA CGGATACGGC CAGGCGCCTG CTCGATGAAT TCGGGATCAC CGTGCTCCGG
GGGAACGCTT CGGAAATCAT GGCCCTTGCG GGCCTGAACA GCACGACCCG GGGTGTGGAC
TCGGTGCACG CAACCGACGA GGCACGGTCT GCAGCGGTTG AATTGGCCAA TGTGTACAAG
GCGGTTGTGG CGATCACCGG CGCGGAGGAC TTCATCACCA ACGGGCCAAA ATCCGCCAGG
GTCGCCAACG GGCATCCCCT CATGGGCAGG GTCTCCGGCA CGGGGTGCGT GGCGTCTTCG
ATCGTGGCGG CCTTCTGTGC GGTTCATCCG GACCCTCTGG TGGCCGCAAC GGCGGGATTG
TCGGTGCTCG GAATCGCAGG CGAGCTTGCC GCACGGGACA ATCCCGGGCC GGGGACGTTT
CATCACCTTC TGCTGGATGC GCTCGATGCG ATGGAAACCC GGAACATCGA AGAGAAAGGA
CGAATTGCCG TTTCATGGGA ACAGTGA
 
Protein sequence
MLAETARCLE KIRAQRPLVH NITNYVVMNY TANALLCLGA SPVMAHAVEE VEAMVELADA 
LVINIGTLSA PWVDAMFLAS RAAIERSIPV VLDPVGAGAT AFRTDTARRL LDEFGITVLR
GNASEIMALA GLNSTTRGVD SVHATDEARS AAVELANVYK AVVAITGAED FITNGPKSAR
VANGHPLMGR VSGTGCVASS IVAAFCAVHP DPLVAATAGL SVLGIAGELA ARDNPGPGTF
HHLLLDALDA METRNIEEKG RIAVSWEQ