Gene Sfum_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3504 
Symbol 
ID4458171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4283491 
End bp4283781 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content58% 
IMG OID639704276 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_847610 
Protein GI116750923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA AGATCAGCAG GGATGAAGTG AGGCACGTTG CCGGTTTGGC GCGGCTCGAA 
CTGAGCGAGC GCGAAGAAAT GCGCATGACC GAGCAGATGA ACCGGATATT GGAGTACATG
GAAACGCTGA ACGAACTGAA CACGGAAGGC GTTCCCCCCA CGACTCACGC CATTCAGCTC
CGGAACGTAT TCCGTGCCGA CGAAGTGCAG CCGTCCCTGG AGCGTCGAGA CACGCTGGCG
AACGCTCCGG AAACGGACGG GGCCAGCTTC GTTGTTCCCA AAGTCATTTG A
 
Protein sequence
MQEKISRDEV RHVAGLARLE LSEREEMRMT EQMNRILEYM ETLNELNTEG VPPTTHAIQL 
RNVFRADEVQ PSLERRDTLA NAPETDGASF VVPKVI