Gene Sfum_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3502 
Symbol 
ID4458169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4281195 
End bp4281872 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639704274 
Productmethyltransferase type 11 
Protein accessionYP_847608 
Protein GI116750921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0622401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA TTTTCGACGA ATGGCCGGAG AAATACGATC AGTGGTTCGA GAGTCCCATC 
GGGAGCCTGG TCCGCGAATA CGAGGCCGGG CTTCTTCTCG AAATGGCCCG TCCGGCTCCG
GGGGAGCGGC TCCTGGACGT GGGTTGCGGC ACCGGGGTCT TCACCCTCGT TCTCCTTGAC
GCCGGCGCGC GGGTCACGGG ACTCGAGCTC TCGCTCCCCA TGCTGAGGCG CGCCGGGAAC
AAAGCGACCG GCCGCCCCTT CCACATGGTC CGGGGCGATA TGCGCACGCT TCCTTTTGCC
GACGCCGCCT TCGACAAGAC GGTGTCGGTG ACCGCCATCG AGTTTCTCGA CGATGCGCGC
GGCGCCGTGG CCGAGTTATT TCGTGTGACG AGGCCGGGTG GGCTCGTCGT GGTCGCAAGC
CTGAACGCCC TGAGCCCCTG GGCGACCAGG AGAACTTCCG CGGCCAGGGA AGGCCACGCC
CTGTTCCGGC ACGCGCGTTT CAGGTCCCCG GCCGAAATGG CCGGGCTCAT GCCGATCCCG
GCTCGCATCG GGACCGCCGT TCACTTTCAA AAACACGACC GCCCGGATCG GGCACGCGAG
ATCGAGGAGG ACGGACACAC ACGAGGATTG GATACCGGGG CGTTCCTCGT CGCCCGCTGG
GAGAAACCGG CGGATTGA
 
Protein sequence
MAEIFDEWPE KYDQWFESPI GSLVREYEAG LLLEMARPAP GERLLDVGCG TGVFTLVLLD 
AGARVTGLEL SLPMLRRAGN KATGRPFHMV RGDMRTLPFA DAAFDKTVSV TAIEFLDDAR
GAVAELFRVT RPGGLVVVAS LNALSPWATR RTSAAREGHA LFRHARFRSP AEMAGLMPIP
ARIGTAVHFQ KHDRPDRARE IEEDGHTRGL DTGAFLVARW EKPAD