| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3496 |
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| Symbol | |
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| ID | 4458198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4272022 |
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| End bp | 4273182 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704268 |
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| Product | ABC transporter related |
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| Protein accession | YP_847602 |
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| Protein GI | 116750915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.149399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCTCC CGCCTGCCGC GCCCGCGTCG GACAGGCAGG GAGTCATCGT TGACGCAGGC
GGAAAACCCG GTTTCCACAA GATGAATATC GAGCTGCGAG ATATCGTCAA GAGGTTTGGT
TCCCTGGAGG CGGTCAGCCA TGTGTCCCTC GATGTCCGGG ACGGGGAGCT TTTCACTCTG
CTGGGGCCCT CGGGTTGCGG CAAGACAACC ATTCTGCGTT TGGTCGGCGG TTTTCATAAC
CCGGATGCGG GAGCTGTTTT TTTCAACGAC AGGGATGTAA CGGGGATTCC GCCGTACGAG
AGAAACATCG GAATGGTTTT TCAGAATTAC GCTTTGTGGC CCCACATGAC CATTTTCGAT
AACGTCGCCT ACGGGCTGAA GATCAAGAAA GTCCCGAAGG GAAGCATCGG TGAAAGGGTC
TCCCGTGCCC TGGGTCTGGT CAACCTGGAG GGGCTCGAAA AACGCTATCC GGGCCAACTC
TCGGGTGGTC AGCAACAGCG CGTCGCGCTG GCTCGCGCCC TGGTTCTGAA CCCGGACGTC
CTCCTGCTGG ACGAACCCCT GAGCAATCTC GATGCCAAGA TTCGCCTGCA GGTGCGCGCG
GAGATTCGAA AGCTCCAGAA AGACCTGGCC ATCACCACGG TCTACGTGAC GCACGACCAG
GAAGAGGCCC TTACCCTCTC GGACCGGATT GCCGTGATCG ATAAGGGGAA ACTGCAGCAG
GTGGGCACGC CGTGGGATCT CTACGAGCGG CCGGCGAATG CCTTTGTGGC GGACTTCATC
GGGATCAACA ACCTGATCCC CGGCCAGGTG CGGGAAGCTG CCGGGGCGGG GGAAGAAATC
ACAGTGGGTA CGGAGGTCGG AATCTTTCTG TGCCGCTCCG ATGTAAGGCT GGAAACAGGG
GACCCGTGCG TGATTTGTGT GCGGCCGGAA ACGGCTTCCA TCGGAGAAAC GGAATCTGCC
CCGGAGGACG TCAACTCGAT GAGCGGCGCG GTCAGTTTTG CGTCTTTCAT AGGCAATGCC
GTTCGCTATG ACGTTGAAAT CGGGAGCGGC GCCATATTCA GGGTCGACGT TCAGAACCCC
CGAAACCACA AGCCTTACGC CATAGGCGAG AAAGTCCGGG TCTTCTTTTC GACGAAGACG
ACCCTGGCTA TTCCCGCGTG A
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| Protein sequence | MSLPPAAPAS DRQGVIVDAG GKPGFHKMNI ELRDIVKRFG SLEAVSHVSL DVRDGELFTL
LGPSGCGKTT ILRLVGGFHN PDAGAVFFND RDVTGIPPYE RNIGMVFQNY ALWPHMTIFD
NVAYGLKIKK VPKGSIGERV SRALGLVNLE GLEKRYPGQL SGGQQQRVAL ARALVLNPDV
LLLDEPLSNL DAKIRLQVRA EIRKLQKDLA ITTVYVTHDQ EEALTLSDRI AVIDKGKLQQ
VGTPWDLYER PANAFVADFI GINNLIPGQV REAAGAGEEI TVGTEVGIFL CRSDVRLETG
DPCVICVRPE TASIGETESA PEDVNSMSGA VSFASFIGNA VRYDVEIGSG AIFRVDVQNP
RNHKPYAIGE KVRVFFSTKT TLAIPA
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