| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3492 |
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| Symbol | |
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| ID | 4458194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4265011 |
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| End bp | 4266093 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704264 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components |
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| Protein accession | YP_847598 |
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| Protein GI | 116750911 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.407437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCT CACATCGCGT TTCGCACGTC TACAAGGTGG TCCTGGTCGC AATGGTCCTG
GCGGCCGTCT TCGGAATGCA GTGTAACGGA GCGCTTGCGG CGCAGAAACA CCGCATCGCC
TGGTCGCACT ACACGGGGTG GGAACCCTGG GCTTACGCCG CTGATTCGGG CATACTGAAG
AAGTGGGCCG ACAAGTACGG AATCGAAATC GAGCTGGTTC TCGTAAACGA CTATGTTGAA
TCGATCAATC TGTACACCGG AGGTCAATTC GACGGCTGCG TCATGACGAA CATGGATGCC
TTGACGATCC CCGCGGTGGG CGGCATCGAC AGTACCGCCG TCATCGTGGG CGATTTCTCC
GACGGAAACG ATGGAATCGT CGTCAGAAAC GGCACCTCGG TCAAGGACCT CAAGGGCCGC
CGAGTGATGC TCGTCGAGCT TTCCGTCTCC CATTACCTGA TGGCTCGAGC CCTCGAACAG
AGCGGCCTCA GCGAACGTGA CGTCACCACC GTGAACACCA GCGACGCGGA CATCGCGGGA
CTCTTCCTCG CCAGCAAGGA TCCAAAGGCG GCGGTCATTA CCTGGAACCC GCTCCTCATG
CAGGTGCGAA ATGCCAAGGG GGTCAACCTT GTTTTCGATT CATCGAAGAT TCCCGGAGAG
ATCATGGACT TGATGGTGGT CCGCACCAGT GCGCCCGACG CGCTCAAGAA AGCCCTGACC
GGCGCTTGGT ATGAAACCAT GGCGATCATG TCCGGGCACA GCAAGACCGC GAAAGACGCC
GTCCAGTTCA TGGCGAAGAC GGCGGGGGGC ACTGAAGCCG AGTTCCGCGC CCAGCTTCGC
ACCACCAGGA TGTTCTACCA GGCTGCCGAA GCGGTTGCCT TCACCAAGGG ACCGGACGTC
AAGAAGACGA TGGACTACGT CCGGACGTTC TGCTTCACCC ACGGTCTGTT CGGGCAGGGG
GCGACATCGA AAGACCACGT CGGCGTTTCG TTTCCCGATG GCTCCATCCT CGGCGATCCG
AAGAACGTCA AGCTCCGCTT CGAGGCCACG TACATGGAGA TGGCCGCAGG CAATGCCCTG
TAG
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| Protein sequence | MNLSHRVSHV YKVVLVAMVL AAVFGMQCNG ALAAQKHRIA WSHYTGWEPW AYAADSGILK
KWADKYGIEI ELVLVNDYVE SINLYTGGQF DGCVMTNMDA LTIPAVGGID STAVIVGDFS
DGNDGIVVRN GTSVKDLKGR RVMLVELSVS HYLMARALEQ SGLSERDVTT VNTSDADIAG
LFLASKDPKA AVITWNPLLM QVRNAKGVNL VFDSSKIPGE IMDLMVVRTS APDALKKALT
GAWYETMAIM SGHSKTAKDA VQFMAKTAGG TEAEFRAQLR TTRMFYQAAE AVAFTKGPDV
KKTMDYVRTF CFTHGLFGQG ATSKDHVGVS FPDGSILGDP KNVKLRFEAT YMEMAAGNAL
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