Gene Sfum_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3484 
Symbol 
ID4458186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4255879 
End bp4256421 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID639704256 
Productredoxin domain-containing protein 
Protein accessionYP_847590 
Protein GI116750903 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.234166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.21665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGT GGGGTACCTG GCGTTTCTGC TGCATTGCAC TGATTGCTCT GACCTTTGCC 
GGGGGATTGG CATGCCCTGT GGGGCCGGCA TCCGCTTCCG AGGCGAAGAT GATGCTGACC
GGCCTGTTCG GGTCCGACCC CAAGGCCCCC GACTTCGAAC TTCCCGACTT GGACGGCAAC
AAGATCGCCC TCAGCAAGTA CAAAGGCAAT CGTCCGGTCC TTTTCTATTT CTGGGCGACC
TGGTGCCCTC ACTGCATGGC GGCCAAGCCT GCCATCATGT CCATCCGCAA GGATATTCCC
GAAAGCAACC TGGAGATACT CGCCATCAAC GTGGGCGGCG GGGATTCCAT CGAGCGTTTG
AAAAAATTTC GGCAAGGCCA CCCCATGCCG TATCCCCTGC TCTATGATGG AGATCAGAAG
GTCTGTCGCG CCTATCAGGT GCAGGGCATC CCGTTGTTCG TCCTTGTCGA CAAGGAGGGG
AAGGTTCTTT ATCGGGCCAA TGAACTGCCC CGGAATGTCA AGGAGCTTTT GAAACTCAAA
TGA
 
Protein sequence
MNRWGTWRFC CIALIALTFA GGLACPVGPA SASEAKMMLT GLFGSDPKAP DFELPDLDGN 
KIALSKYKGN RPVLFYFWAT WCPHCMAAKP AIMSIRKDIP ESNLEILAIN VGGGDSIERL
KKFRQGHPMP YPLLYDGDQK VCRAYQVQGI PLFVLVDKEG KVLYRANELP RNVKELLKLK