Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3480 |
Symbol | |
ID | 4458217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4252341 |
End bp | 4253321 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704252 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_847586 |
Protein GI | 116750899 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.240532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.151496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATGG CGGGTTGTGT TCTGTTGGTG TTGTTCTGCG TCATTGCGGC GTCGGGCAGG TGCGCTGCGG ACTCCTTGGA CCGTATCGTC GCGGTGGTGA ACGGCGAAAT CATTCTTTAC AGCGAGTTGC AGGAGCGGTT GCAACTCGTT CAAAAGAGCC TTCCTGAAAC GAGAACGAAC GATCCCGCCC GCAAGGCCGC GATCGAACGG GAGCTGTTGC AGCAGATGAC GCGCGAGAAG CTCACCGAGC AGGAAGCAAA GCGTCTCAAG ATCACCGTGA CCAAGAAAGA CGTGGATGAG GCCATCGCCT TTGTGATGGC GGACCACAAT GTCAGCCAGG CCCAGATGGA GGCGAGGCTC AAGGAGAGCG GCCAGTCCAT GGAGGAGTTT CGTAAGGTGC TCACAAAAGA TCTGGAGCGG GACCGCCTTC TGGAAAGAGT GCTCAAGTCC AAAATCCTTA TTTCCGAAAA GCAGATTGAT GCTTTTTTGA GCCAATCGCC GCCGGAAGTC AGAGTGGAGC CCCGAGGCAA GGAAGAGTAC CGGCTGGGGA TCATTTTCCT TCCCGCCTCC GACGGGGCTG AGGGCAAACA GGCGGAAAAG CGGGCGCGGG AGATTCGGGA GAAGTTGAAA GCGGGCGAGG ATTTCGCTGC AATGGCCAGG CAATACTCCA AGGGACCGGC CGCACAGGAC GGCGGAGACG TGGGGTTCGT CAGCCTTGAC GAACTTGCCC CTTTTATCGC GAAGAACGTA AAGGATCTGA AGATAAATCA GCCGTCGGAT GTTGTGAAAG GCGGGGACGG GTATTACATC TTCCTGGTTA CCGATGTTCG CAGGGCGGAA ATGCAGGCCG CTCAAAATTC CCCGGCGACA AACATGCGCG AGAGGGCCCG CAGGCAGCTC TACCAACAGG AGATGGCGCG CAGGTTCGAT GAATGGATCA AGGACCTGGA ATCACGGTCT TTCGTAAAGA TCTCACTCTA A
|
Protein sequence | MRMAGCVLLV LFCVIAASGR CAADSLDRIV AVVNGEIILY SELQERLQLV QKSLPETRTN DPARKAAIER ELLQQMTREK LTEQEAKRLK ITVTKKDVDE AIAFVMADHN VSQAQMEARL KESGQSMEEF RKVLTKDLER DRLLERVLKS KILISEKQID AFLSQSPPEV RVEPRGKEEY RLGIIFLPAS DGAEGKQAEK RAREIREKLK AGEDFAAMAR QYSKGPAAQD GGDVGFVSLD ELAPFIAKNV KDLKINQPSD VVKGGDGYYI FLVTDVRRAE MQAAQNSPAT NMRERARRQL YQQEMARRFD EWIKDLESRS FVKISL
|
| |