Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3477 |
Symbol | |
ID | 4458214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4246870 |
End bp | 4248291 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704249 |
Product | L-seryl-tRNA selenium transferase |
Protein accession | YP_847583 |
Protein GI | 116750896 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.213454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.293917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGA CTTCCATGCA AGATTTGCTT CGCCGTCTCC CGAGCGTCGA TGCCCTGCTG CAGGCGGATG CCGTCCGCGA GGCCCTGGAC CGACATCCCC GCAGACTGGT CCTTGACTGT ATTCGCCAGG TTCTGGAAAC AACCCGACAA CGGCTGATCG AGGGGGCTCC GGGCGACGCC CCGGGAGAAC CGGAGCACGC GACCCTGGTG CAGGCCATCC TGGAGCGGAT CGAAGCCGCC GGCAGCTTTA CGCTCCGCAA TGTAGTCAAC GCCACGGGCA TCATCGTTCA TACCAACCTC GGCCGATCCC TGCTTCCGCG GGAAGCGGTC GAGCGGCTCC AGCTCATCTG CCGGACCTAC AACAACCTCG AATACAATCT CGAGCTCGGC CGTAGAGGAT CGCGGTACGT TCACGCGGAA TCGATTCTGT GTGAATTGAC CGGAGCGGAA AGCGCCCTGG TGGTCAACAA CAACGCCGGA GCCGTCTTCC TGGTGCTGAA TACCCTCGCG AAGGACATGG AGGTCATCGT CTCCCGCGGA CAGCTGGTGG AAATCGGCGG TTCCTTCCGG ATTCCGGACG TCATGCGCTC GAGCGGCGCC CTCCTGCGCG AAGTCGGATG CACCAACCGG ACGCATCCCC ATGATTTCGT TTCGGCGATC AACGACCGCA CCGCCCTGCT GATGAGAGTG CACACCAGCA ATTACCGGAT CCTCGGGTTC ACCGCCGAAG TGTCTCTCGA AGAAATGGTG TCCATGGGAA GAGCGCACGG ATTGCCCGTT GTGGAAGATC TCGGCAGCGG TTCCCTCATC GACCTGTCCA GGTATGGGCT GACGGGGGAA CCCACGGTTC GGGAGGCCGT CCGCAACGGA GCGGACGTCG TGACCTTCAG TGGCGACAAG CTCCTGGGGG GACCTCAGGC GGGCGTCATC CTGGGGAGGA AGGACCTCAT CGATCGGTGC AAGAAGAACC CCATCACCCG TGCACTGCGA GTGGACAAGC TCACTCTGGC CGCGCTCGAG GCGACCCTCC GCCTGTATCG CGACGAAAAT CGGGCCATTG AGCGCATCCC CGTCCTCAGA ATGATCGCGC TGTCCACGGA TGCGCTCAAC GATACCGCAC AAGCGCTTTG TTCCCTGATT CGGCAAATCG ACACGCAACA GCGGCTTGTC GTCGAAGTCC GGAGCAGCTC TTCCCAGGTC GGCGGGGGCT CGCTCCCTGC CCAGAATCTT CCCACACGGG TGGTAACCGT CCACGGGACG GAGATCTCCG CCCAAAAGAT CGAGGGTTTC CTGAGAAACA ACGACCCGCC GATCATCGGT CGAATCGAAT CCGATCAATT CCTGATGGAT ACGCGAACAC TGTTGCCGGA CGATCTTCAC ACCATCGGCA ATGCGTTCGC GCGGTTGCTG TGCAGCCCGT AG
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Protein sequence | MSKTSMQDLL RRLPSVDALL QADAVREALD RHPRRLVLDC IRQVLETTRQ RLIEGAPGDA PGEPEHATLV QAILERIEAA GSFTLRNVVN ATGIIVHTNL GRSLLPREAV ERLQLICRTY NNLEYNLELG RRGSRYVHAE SILCELTGAE SALVVNNNAG AVFLVLNTLA KDMEVIVSRG QLVEIGGSFR IPDVMRSSGA LLREVGCTNR THPHDFVSAI NDRTALLMRV HTSNYRILGF TAEVSLEEMV SMGRAHGLPV VEDLGSGSLI DLSRYGLTGE PTVREAVRNG ADVVTFSGDK LLGGPQAGVI LGRKDLIDRC KKNPITRALR VDKLTLAALE ATLRLYRDEN RAIERIPVLR MIALSTDALN DTAQALCSLI RQIDTQQRLV VEVRSSSSQV GGGSLPAQNL PTRVVTVHGT EISAQKIEGF LRNNDPPIIG RIESDQFLMD TRTLLPDDLH TIGNAFARLL CSP
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