| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3476 |
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| Symbol | |
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| ID | 4458213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4245905 |
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| End bp | 4246780 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704248 |
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| Product | heat shock protein DnaJ domain-containing protein |
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| Protein accession | YP_847582 |
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| Protein GI | 116750895 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00429307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.270651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAC AAGACTACTA CGGGGTGTTG AACGTTTCGC CCGAAGCTTC CTCGGAGGAG
ATCAAACGGG CGTATCGCAA GCTGGCTCTA GAAACGCATC CCGACCGCAA CCCCAACGAC
CGTAATGCCG AGGAGCGCTT CAAGAGAATC AACGAAGCCT ACGGCGTGCT GTCCGATCCC
GGCAAACGCT CCCAGTACGA TCAGTACCGG AGACTGGGGG TTCATCAGGG CCCCGGCGGT
TATGGGCGGC CCGGTTTCGG CTATTCCCAG GAAGAGATCT TTCGGGATTT TGTCAATAAC
CGTCACGCCA ATGATGTTTT TGCGGAAATG CAGCGGGAAT TCCAAAGGAT GGGATTTCGC
TTCGACGAGC GTTTCATCAA CCGGATCTTC TTCGGTGACA AGACGTTCAC CATTCAAGGC
TTTTTCTGGG GCGGCCCCAT GGGAAGCACA AGCATGAGGC GGCCCGGTTC TCCGGCTGCC
GATCATCCCG GGACCGCCTC CGGTCGCGAC GGAGCGGATG GGCCCGGAGC TCCCGGTCCC
ATGGGAATCG TCAAGGAGGG GCTATCCCTC CTGTATAAGG CCGGAAAGAA GATCGGCGGA
TACCTCATCG ACAAGGTGCT CGGCCAGGAG CCGCAGGGCG ATCGGGCGCG TCCGGGGGAA
TTCGACATCA CCTACAGACT GGTCATCTCT TCGCACGACG CTGCCAGAGG GACCACCGTC
GAGGTCGAGC TTCCTCATCT CCAGGACGGA AAGCGGGTCG CCGTCACCAT CCCGGCTGGA
GTGAGGAACG GGATGAAGCT GCGCCTCAAG GACATGGGAC GTCCCTTGAG CGGCCTCACC
CGTGGGGACC TCTATCTTCA GTTGCAGGTG GTGTGA
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| Protein sequence | MPQQDYYGVL NVSPEASSEE IKRAYRKLAL ETHPDRNPND RNAEERFKRI NEAYGVLSDP
GKRSQYDQYR RLGVHQGPGG YGRPGFGYSQ EEIFRDFVNN RHANDVFAEM QREFQRMGFR
FDERFINRIF FGDKTFTIQG FFWGGPMGST SMRRPGSPAA DHPGTASGRD GADGPGAPGP
MGIVKEGLSL LYKAGKKIGG YLIDKVLGQE PQGDRARPGE FDITYRLVIS SHDAARGTTV
EVELPHLQDG KRVAVTIPAG VRNGMKLRLK DMGRPLSGLT RGDLYLQLQV V
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