Gene Sfum_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3472 
Symbol 
ID4458209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4240090 
End bp4240914 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID639704244 
Productpolypeptide-transport-associated domain-containing protein 
Protein accessionYP_847578 
Protein GI116750891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0350716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0407189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA AGCAGAACCG GTATCGCCCA GACAAGGCCA GGCCTTTGAA AATCCTCAAA 
TTTTGGGGAA AGACAGTCTT GACTCTCCTG CTGGCGGTTG CCGCGGTTGT GCTCATTAGT
GCTGGTCTTT CGCGCTCTTA CTATGCCCTG TTGGAGGCAC CCTGGCTGAG GTTGGAGGAA
GTGCGCATCA ATGGGCTGAA ACATCTCGAA GAGGGCCTCG TTTTGAACGC GCTGGGCGTT
CCCAGGAACG CCTGCGTCTT GAATCTGAAG ATGAAGGAAC TGGCGGCTCG ACTCGAGTCT
TTGCCGCAGG TGCGCTCGGT GATCGTGCGC CTCGATCTTC CCACGCGGCT GGTGGTGGAG
ATCACCGAGC GTGAGCCGCT CGCGATGGTG CAGGCCGATG AGCTGCTCTT GCTGGACAAG
GACGGAACGC TGTTTGCCCG GACCACCCGC GACGCCGATC CCGAGAGGCT GCTGATTACC
GGGTTTTCCG GCAAGGGGCT GAAGGAGGGG GATCATTTGC CCCGGGAACC TCTGGAAGCT
GTAAGAGAGC TCGCGGCGGC CCTCGAAAAG GCCAGGCAGT GGTTGCCGGT GCAACGCATT
TCGGAGTGCC AGTGGCGTTC CGGCGGCTTC ACCCTGTTCA TGGCTCAGAC CTCGCTTCCC
ATTGACTTCG GGTCTGAGAA CTACGGCGAG AAACTGAATC GCCTTCAGCG GATTTTCGCC
ATGCTGGGGG AACGGCAGTG GACCGGTGCC GTCAAGTATA TTGACCTGAA TTATGGAAAT
CGAGCCTATG TGGGAGGGCC GTTCCCGGCA GCCAAAGGCG CCTGA
 
Protein sequence
MKKKQNRYRP DKARPLKILK FWGKTVLTLL LAVAAVVLIS AGLSRSYYAL LEAPWLRLEE 
VRINGLKHLE EGLVLNALGV PRNACVLNLK MKELAARLES LPQVRSVIVR LDLPTRLVVE
ITEREPLAMV QADELLLLDK DGTLFARTTR DADPERLLIT GFSGKGLKEG DHLPREPLEA
VRELAAALEK ARQWLPVQRI SECQWRSGGF TLFMAQTSLP IDFGSENYGE KLNRLQRIFA
MLGERQWTGA VKYIDLNYGN RAYVGGPFPA AKGA