| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3467 |
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| Symbol | |
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| ID | 4458204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4233605 |
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| End bp | 4234996 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639704239 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_847573 |
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| Protein GI | 116750886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.154027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0184254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGA CCGTCGCACA AATCGTTGAT GCCGTTCGAG GTCGCCTGAT GGCCGGCGAT
CCGGCTCTCC CCGTCGACGC GATTTCCACC GACACGCGCA GCCTGCGGCG CTCGGACTGT
TTTCTGGCGC TTGCGGGCGA GCGATTCGAC GGCCACGATT TCATTTCGGC GGCCGTCGAA
AAGGGGGCGG CGGTTGTGGT GGTCGCCTCC GGCCGCGGAG AGGGGGCGGT TCGAGCTGGA
AGTGTCGCCG TGGTGGAGGT GGACGACACC CTCTACGCTC TCGGCGAGTT GGCGAGGACC
CACAGGGCGC GGTATTCGAT CCCGGTGGCG GGTATTACGG GAAGCAACGG CAAGACGAGC
ACCAAGGAAC TGCTGGCGGC GATCCTGGAG CACAGACACG GGATTCTGAA AAACCGGGGG
AACCTCAACA ACCAGATCGG TGTGCCTCTG ACCCTGTTGA CCATGGATCC GACCCATGAA
GCGGCCGTTA TCGAGATGGG CATCAACGTG CCCGGCGAGA TGGCCCGATT GGTTGAGATT
GCGGGTCCGA CGCTGGGGCT GATCACGAAT ATCCAACCGG CGCACCTCGA AGGGCTCGGC
TCGTTGGACG GCATCCTGAA AGAAAAGGGC AGGCTGTGGG ATGCGCTCGA TGCCGAGGGG
ATCGCCGTCG TGAACCTTGA TGACCAGCGG TTGCGAGCCT ATTCGAAGCG ATTGGCGGCC
CGGACGGTGA CCTGCTCCGT GCGGGACCCT GAAGCGGGAG TGCGAGTGGT CGGCGAGATC
GAGAGCGATG AACATTCCAC CCGTTTTCGG ATGGTCCTGG GGACGGAAAC CGTGCCGGTC
GTCCTGTCGG CCGTCGGGAT CCATTATGTC CGGAATGCGC TGGCCGCGGC TGCCGCCGCC
TGGGCGATGG GGGAACCGGG GGAGGCGATC TCCGCGGGGC TTGCGGCGTA CCGACCTGTC
GGGCAGCGGA TGCAGATACG TCACATGGAA GACGGGCGGG TGCTCATTGA CGATACGTAC
AACGCCAACC CCGAATCGAT GCTCGCCGCC GTGCGGGCGG CGTTGGCGGT ATGCCGGGGA
AAGCCTTGCA TTGCGGTGCT GGGAGAGATG AGGGAGCTGG GAGCCGACAG CGCCGCATTG
CACCGTGAGT TGGGCAGACG GATCGGTGCC ATGGGGTTGA GCGGCCTGAT CACTTTGGGA
GAGCTTGCGG CGAGAATCGG CGAAGGCGCG GTGGAGGCCG GTATGAAGCC CGCTGCGTGT
CGGCATGCCA AGAGCCACGA CCAGGTGGTG GAGTGGCTTC GGGAACGGAA AATCGATGCT
TCCTGGATAC TTGTAAAAGG GTCCCGGGGA ATGACGATGG AACGGGTTGT GGAAGGGATG
CTCGGGCGAT GA
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| Protein sequence | MQWTVAQIVD AVRGRLMAGD PALPVDAIST DTRSLRRSDC FLALAGERFD GHDFISAAVE
KGAAVVVVAS GRGEGAVRAG SVAVVEVDDT LYALGELART HRARYSIPVA GITGSNGKTS
TKELLAAILE HRHGILKNRG NLNNQIGVPL TLLTMDPTHE AAVIEMGINV PGEMARLVEI
AGPTLGLITN IQPAHLEGLG SLDGILKEKG RLWDALDAEG IAVVNLDDQR LRAYSKRLAA
RTVTCSVRDP EAGVRVVGEI ESDEHSTRFR MVLGTETVPV VLSAVGIHYV RNALAAAAAA
WAMGEPGEAI SAGLAAYRPV GQRMQIRHME DGRVLIDDTY NANPESMLAA VRAALAVCRG
KPCIAVLGEM RELGADSAAL HRELGRRIGA MGLSGLITLG ELAARIGEGA VEAGMKPAAC
RHAKSHDQVV EWLRERKIDA SWILVKGSRG MTMERVVEGM LGR
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