Gene Sfum_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3458 
Symbol 
ID4458230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4225255 
End bp4225716 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID639704230 
ProductNUDIX hydrolase 
Protein accessionYP_847564 
Protein GI116750877 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000764325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCGGA GATATCCCGA ATACCCGCTG GTCGGCGTGG GTGCGATCAT TTTTCGAGAC 
GAGCGGGTGC TTCTCGTGCA AAGGGGAACG GAGCCCGCCT ACGGAAAATG GTCCATTCCC
GGCGGACTGG TGGAACTGGG TGAAAGCCTG GAAACGGCGG TACGCCGAGA AGTCGGCGAA
GAGGTCAACC TCGACGTCAG TGTCGTCGAC CTCGTGGCCG TCCTTGACAG CGTCTTCCGG
GACGAGAACA GAAAGGTGGA ATATCATTAC GTGCTCCTCG ATTTCCTCTG CGAAAGCCCG
GAGGGAGATC CCTGCCCGGC ATCGGATGTC CTGAGCTGCA TGTTCGTGCC GTTGGACGAG
TTGGGGCGCT ACCCCATGAC CCGGGGCACC GAAAATGTCA TCAGGAGGGC GTTCGCCCGG
ACCGGCGGCG CGCGCGCTCC CATCTACGAC ACCTTCCTCT GA
 
Protein sequence
MDRRYPEYPL VGVGAIIFRD ERVLLVQRGT EPAYGKWSIP GGLVELGESL ETAVRREVGE 
EVNLDVSVVD LVAVLDSVFR DENRKVEYHY VLLDFLCESP EGDPCPASDV LSCMFVPLDE
LGRYPMTRGT ENVIRRAFAR TGGARAPIYD TFL