| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3451 |
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| Symbol | |
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| ID | 4458223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4214365 |
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| End bp | 4216293 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704223 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_847557 |
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| Protein GI | 116750870 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000151331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCGCCA ACGGCATGAG ATATGACGTC AGTCTTCTGA CCGATCAGGA CATCTATCTT
TTCAGGCAGG GAAATCATTT TCGGCTGTAT GAGAAAATGG GGGCGCATCT CATGGAGATC
GACGGCGTTT CGGGCACCCT GTTCGCCGTC TGGGCGCCCA ACGCCGAGCA GGTTTCCGTC
ATTGGAGACT TCAACGGCTG GAACCGTGGA GCTCATCCCT TGAGGGTGAG GGAGGACAGC
TCGGGGATAT GGGAGGGGTT CGTCGCCGGA GTGAAGGCCG GAGACATTTA CAAGTACCAT
ATTGTTTCAA GGGAAAACGG ATATCGGGTG GACAAGGGGG ATCCGTTCGC GACCCACTGG
GAAACCCCGC CGCGCACCGG TTCCATCGTG TGGGACAGCA GTTTTGCGTG GAACGACGGA
GAATGGATGG AAAACCGGAA ACGCAGCAAT GCGCTCGACG CCCCCTGTTC GATCTACGAG
GTTCATCTCG GCTCCTGGAG GCGGGTTCCC GAGCAGGACA ACAGGTCCCT CAACTATCGC
GAGATGGCGG AGGATCTGCC CGGATACTTG CGTGACATGG GATTCACCCA CGTGGAATTC
CTGCCGGTCA TGGAGCACCC TTTCTACGGA TCCTGGGGCT ACCAGACGGT GGGGTACTTC
GCGCCGACGT CGCGATACGG GACGCCCCAG GACTTCATGC ACCTCGTCCA ACGGCTGCAC
CAGGCCGGGA TCGGGGTCAT TCTGGACTGG GTCCCGTCGC ATTTTCCCAG CGATGAGTAC
GGCCTGGTCT ATTTCGACGG CACCTACCTC TTCGAGCATG CCGACCCGAA GAAGGGATAT
CATCCGGAGT GGAACAGCTA CATATTCAAT CACGGCAGGT ACGAGGTCCG GTCGTTTCTG
ATCAGCAGCG CCATGTTCTG GCTGGACCGC TACCGGGTGG ACGGTCTGCG CGTGGATGCC
GTGGCCTCGA TGCTCTACCT GGATTACGCC CGGCAGGATG GGGAATGGAT CCCCAACGAG
CACGGGGGCA AGGAGAACCT CGACGCCATA TACTTCCTCA GACGATTCAA CGAAATCGTC
TACAGGGACT TCCCCGACTG CCAGACGATC GCCGAAGAGT CCACCTCCTG GCCCATGGTT
TCCCGACCTT CCTATGCCGG CGGGCTGGGT TTCGGGATGA AATGGAACAT GGGGTGGATG
CACGACACCC TGGACTATTT TTCCAAGGAG TCCATTCATC GCAAATACCA CCAGAACCAG
CTCACGTTCA GCATCTGGTA CGCATTCTAC GAAAACTTCG TGCTTCCCCT GTCTCACGAC
GAGGTGGTCT ACGGCAAGGG GTCCCTGCTG AACAAGATGC CGGGAGACGA CTGGCAGAAA
TTCGCAAATT TGCGGCTTCT GTTCGGCTAC ATGTTCGGGC ATCCCGGCAA GAAGCTGCTG
TTCATGGGGG GGGAATTCGG ACAGTGGGAC GAATGGTACC ATGAAAAAAG CCTCGACTGG
AACCTGCTCG AACACCCGCC TCACCAGGGA ATGCAGCAGT GGGTCCGGGA CTTGAACCGC
TTCTATCGCG GCGAACCGGC GATGCATGAG GTGGATTTCG AAAATCAGGG GTTCCAATGG
ATCGATTTTC GTGACGCGGA TTCGAGTGTT TTGTCCTGGC TGCGGAAGGG TCGTAGCACA
AAAGACATCG TCGTCGCGGC GGCGAATTTC ACGCCGGTGC CCAGGGAAGG CTACCTGACG
GGTGTGCCCC GGGGCGGCTT CTGGCGGGAG ATGCTCAACA GCGATTCCGA AATATACGGC
GGGGGAGGTC TCGGCAACGC GGGGGGACTC GAAGCCGCGC CTGTTCCGTG CCACGGGAGA
CCCTGGTCTC TTTCACTGGT CCTGCCGCCC CTGGGCGTGG TGTTCCTGAA GAGCGAAGGC
ACGAATTGA
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| Protein sequence | MSANGMRYDV SLLTDQDIYL FRQGNHFRLY EKMGAHLMEI DGVSGTLFAV WAPNAEQVSV
IGDFNGWNRG AHPLRVREDS SGIWEGFVAG VKAGDIYKYH IVSRENGYRV DKGDPFATHW
ETPPRTGSIV WDSSFAWNDG EWMENRKRSN ALDAPCSIYE VHLGSWRRVP EQDNRSLNYR
EMAEDLPGYL RDMGFTHVEF LPVMEHPFYG SWGYQTVGYF APTSRYGTPQ DFMHLVQRLH
QAGIGVILDW VPSHFPSDEY GLVYFDGTYL FEHADPKKGY HPEWNSYIFN HGRYEVRSFL
ISSAMFWLDR YRVDGLRVDA VASMLYLDYA RQDGEWIPNE HGGKENLDAI YFLRRFNEIV
YRDFPDCQTI AEESTSWPMV SRPSYAGGLG FGMKWNMGWM HDTLDYFSKE SIHRKYHQNQ
LTFSIWYAFY ENFVLPLSHD EVVYGKGSLL NKMPGDDWQK FANLRLLFGY MFGHPGKKLL
FMGGEFGQWD EWYHEKSLDW NLLEHPPHQG MQQWVRDLNR FYRGEPAMHE VDFENQGFQW
IDFRDADSSV LSWLRKGRST KDIVVAAANF TPVPREGYLT GVPRGGFWRE MLNSDSEIYG
GGGLGNAGGL EAAPVPCHGR PWSLSLVLPP LGVVFLKSEG TN
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