Gene Sfum_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3448 
Symbol 
ID4458253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4210927 
End bp4211679 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID639704220 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_847554 
Protein GI116750867 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000100698 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAGGCA GGCGAAAGAT CATAGAAATC GACGAGGAGC GCTGCGACGG TTGCGGGCAA 
TGCGTTGTGA AGTGCGCGGA AGGCGCAGTC GAGATCATCG ACGGCAAAGC GAAGCTGATC
AAGGATTCCT TTTGTGACGG GCTGGGGGCC TGTCTCGGGG AATGTCCGCG GGGCGCTCTG
AAAATCGTGG AAAGGGAAGC CCCGGAATTC GATCCCGAAG CGGTGGAGCG GCACCTGGAG
GAACGCGAGA AAAGGCGATC GGCCGCGGAA CCCGCCATGG CCTGCGGCTG TCCTTCCAGC
CAGATCAGGG TGTTCCAGGG ACTCGCCTCG ACCCCCCCGA CCGCCGCGGA ACCGGGAAAC
GCCGCGCCGT CGGCGCTGGC GCACTGGCCG GTCCAACTCA GGCTCGTGCC GCCCCAGGCG
CCTTTCCTCA AGGATGCCGA CCTGCTCGTT GTCGCCGACT GCGTGCCCGT GGCCCATCCC
GACTTCCACC GGAAGTTCGT GGCGGGCAAG GTGGTTCTGC TCGGCTGTCC CAAGTTCGAC
AACGCGGCGG AATACGTGCA GAAATTCGAG CAGATTTTCC GGACCGCCAA CATTCGTTCC
GTCACGGTGC TCGATATGGA AGTGCCCTGC TGCTCGGCCA TGCCCGTCAT CGTGAAGAAG
GGCATGGGAG CCTCCGGCAA GACCGTCCCC ATGGAAGAGA TCGTGGTGAG CGTGCGAGGC
GAAGTGCTCA AAAGAAACGG CAAGGCGGCC TGA
 
Protein sequence
MEGRRKIIEI DEERCDGCGQ CVVKCAEGAV EIIDGKAKLI KDSFCDGLGA CLGECPRGAL 
KIVEREAPEF DPEAVERHLE EREKRRSAAE PAMACGCPSS QIRVFQGLAS TPPTAAEPGN
AAPSALAHWP VQLRLVPPQA PFLKDADLLV VADCVPVAHP DFHRKFVAGK VVLLGCPKFD
NAAEYVQKFE QIFRTANIRS VTVLDMEVPC CSAMPVIVKK GMGASGKTVP MEEIVVSVRG
EVLKRNGKAA