Gene Sfum_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3434 
Symbol 
ID4458270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4194813 
End bp4195673 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID639704204 
Productmethyltransferase type 11 
Protein accessionYP_847540 
Protein GI116750853 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00012204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAAGC TGCTGCCCGA TCAACTCAAA GAGTTGTGGC GCTGCGTCGA TCGCGGACAG 
TTGACGCGGG AGGAGTTCGC CCGGGAGCAG GAACGGCTTC TGGGCGGCTA CCGGGAGCGG
TGGGAGGCGG CGCTCCTCAC CGGCGGCCAC ACCGACCTGG AATCGAGCCT GATCGGCGAG
TTGGCCCTCT ACTTCGGACA CGATGAATCG GAACACACCC GGCTGCAGTG TTCGGACGCC
CTGGCCAACG TCAAAGGCGA ATGGCACAAG GCCGTCGACC CCGGGGACCG GCGGTCCGTC
GAACGGTTCT ATGAGGAGAG CCGGGCCATG ATCTATGAGC TCGTGTGGTG GCACACCCTG
TGCGAGGATA CCTCTCCTCT GGCCTATGTG ACGGCCCTGC ATTTCGCCGA ATTGCACGGC
TGTCGAACGA CGCTCGATTT CGGGGCGGGG GTGGGCTCGG GCGGCATCGT CTTCACCCGT
AACGGGTTGA AGGTTACCCT GGCCGACATC AGCACATCCA TGCTGGATTT CAGCCGGTGG
CGCTTCAACC TCAGGGGTCT CGAAGGGGAA TTCACGGATC TGAAGACGGA TACGCTTCCA
CCCGGGGCCT ATGACCTGGT GGTGGCGATG GACGTCTTCG AGCACCTGGT GGACCCGGTG
CGGACGGTGG ACGATCTGTG GCGGGCCATG AAACCGGGAG GTTACCTGTT CGGCCGGTTT
CACGCGGAAC TGGACGAAGA CCGCCCCCAT CACATCGTCC GGGATTTTGC GCCGACTCTC
GAACGGCTGC GGACGCTGGG TTTTGAGGAA TGCTGGCGTG ACGAATGGTT GTGGGGGCAC
CAGGCGTTCC GCAAAACGTG A
 
Protein sequence
MGKLLPDQLK ELWRCVDRGQ LTREEFAREQ ERLLGGYRER WEAALLTGGH TDLESSLIGE 
LALYFGHDES EHTRLQCSDA LANVKGEWHK AVDPGDRRSV ERFYEESRAM IYELVWWHTL
CEDTSPLAYV TALHFAELHG CRTTLDFGAG VGSGGIVFTR NGLKVTLADI STSMLDFSRW
RFNLRGLEGE FTDLKTDTLP PGAYDLVVAM DVFEHLVDPV RTVDDLWRAM KPGGYLFGRF
HAELDEDRPH HIVRDFAPTL ERLRTLGFEE CWRDEWLWGH QAFRKT