Gene Sfum_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3430 
Symbol 
ID4458266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4192055 
End bp4192609 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID639704201 
Productisochorismatase hydrolase 
Protein accessionYP_847537 
Protein GI116750850 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000128039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCGG CACTCATACT CATCGACATT CAGAACGATT ACTTCCCCGG CGGGAAAATG 
GAGGTGGAGG GAAGCGTCGA GGCGGGTCTT GCGGCACGAG ACGTTCTTTC CCTCTTCCGG
CGCAGACGGC TGCCGCTCGT GCACATCCGG CACTTCTCCG TTCGACCCGG GGCAAGCTTT
TTTCTCCCGG AAACGAAGGG CGTCGAAATC CACGAAACCG TGGAACCGCT GGCCGGCGAG
ACGGTCTTCC CCAAGAATTT CCCCAACGCC TTTCGGAACA CGCCCCTCCT GGAACACCTG
AAAGGTCTTG AAATCGACCA TGTGGTCGTC GTCGGAATGA TGACGCACAT GTGCGTGGAT
GCCACCACCC GCGCGGCTTT CGACCACGGG TTCGGCTGCA CCGTGGTGCA CGACGCCTGC
GCCGCCAGGG CGCTCACTTT CGGAGATGAG CTCATTCCCG CCGTACACGT GCACAAGGCG
TTCCTGGCGG CGCTCGGCTC CGTGTACGCC AGGGTGGTCG GTGCCGCGGA TCTTTTGCGG
GACTTCCCGC GATGA
 
Protein sequence
MNPALILIDI QNDYFPGGKM EVEGSVEAGL AARDVLSLFR RRRLPLVHIR HFSVRPGASF 
FLPETKGVEI HETVEPLAGE TVFPKNFPNA FRNTPLLEHL KGLEIDHVVV VGMMTHMCVD
ATTRAAFDHG FGCTVVHDAC AARALTFGDE LIPAVHVHKA FLAALGSVYA RVVGAADLLR
DFPR