Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3430 |
Symbol | |
ID | 4458266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4192055 |
End bp | 4192609 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704201 |
Product | isochorismatase hydrolase |
Protein accession | YP_847537 |
Protein GI | 116750850 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000128039 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCGG CACTCATACT CATCGACATT CAGAACGATT ACTTCCCCGG CGGGAAAATG GAGGTGGAGG GAAGCGTCGA GGCGGGTCTT GCGGCACGAG ACGTTCTTTC CCTCTTCCGG CGCAGACGGC TGCCGCTCGT GCACATCCGG CACTTCTCCG TTCGACCCGG GGCAAGCTTT TTTCTCCCGG AAACGAAGGG CGTCGAAATC CACGAAACCG TGGAACCGCT GGCCGGCGAG ACGGTCTTCC CCAAGAATTT CCCCAACGCC TTTCGGAACA CGCCCCTCCT GGAACACCTG AAAGGTCTTG AAATCGACCA TGTGGTCGTC GTCGGAATGA TGACGCACAT GTGCGTGGAT GCCACCACCC GCGCGGCTTT CGACCACGGG TTCGGCTGCA CCGTGGTGCA CGACGCCTGC GCCGCCAGGG CGCTCACTTT CGGAGATGAG CTCATTCCCG CCGTACACGT GCACAAGGCG TTCCTGGCGG CGCTCGGCTC CGTGTACGCC AGGGTGGTCG GTGCCGCGGA TCTTTTGCGG GACTTCCCGC GATGA
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Protein sequence | MNPALILIDI QNDYFPGGKM EVEGSVEAGL AARDVLSLFR RRRLPLVHIR HFSVRPGASF FLPETKGVEI HETVEPLAGE TVFPKNFPNA FRNTPLLEHL KGLEIDHVVV VGMMTHMCVD ATTRAAFDHG FGCTVVHDAC AARALTFGDE LIPAVHVHKA FLAALGSVYA RVVGAADLLR DFPR
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